Information on SUBCLASS 5.3.3 |
Subclass Accession number: 4880
Subclass: 5.3.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 15.2 +/- 14.8 Average RMSD (Å) : 1.080 +/- 0.363 Consensus geometry
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Consensus Sequence: | XcpXpIpXX |
(φψ)-conformation: | aapaappaa |
Pattern: | x | [CLW] | x | [QST] | [ckl] | [ftv] | [DKNS] | [DEKNS] | x | [DNQT] | [IV] | [DNST] | x | [epq] | [EKQ] | [KL] | [afv] | [dgpq] | x | [LM] | x | [EKNT] | x |
Conservation: | -1.141 | 0.186 | -0.991 | 0.471 | -0.791 | -0.798 | 0.647 | 0.248 | -0.594 | 0.106 | 2.393 | 0.707 | -0.878 | -0.314 | 1.396 | 0.847 | -0.982 | -0.691 | -1.249 | 1.976 | 0.015 | 0.228 | -0.792 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ezf_A_64 | 1ezf | A | 78 | 100 | ALDTLEDDMTISVEKKVPLLHNF | HHHHHHH-TTS-HHHHHHHHHHH | aaaaaaaxaaxxaaaaaaaaaaa |
1hf8_A_39 | 1hf8 | A | 44 | 66 | YLIQCTNEMNVNIPQLADSLFER | HHHHHHT-TTS-HHHHHHHHHHH | aaaaaaaxaaxxaaaaaaaaaaa |
1klx_A_29 | 1klx | A | 29 | 51 | GCLSLVSNSQINKQKLFQYLSKA | HHHHHHT-TTS-HHHHHHHHHHH | aaaaaaaxaabxaaaaaaaaaaa |
1n5d_A_151 | 1n5d | A | 152 | 174 | ELQQKFKSETITEEELVGLMNKF | HHHHHHS-SS--HHHHHHHHHHH | aaaaaaapaapbaaaaaaaaaaa |
1v54_E_8 | 1v54 | E | 14 | 36 | RWVTYFNKPDIDAWELRKGMNTL | HHHHHHT-TT--HHHHHHHHHHH | aaaaaaapaapxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.6.123 |
CLUSTER: HH.7.105 |