Information on SUBCLASS 5.7.3 |
Subclass Accession number: 4894
Subclass: 5.7.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>50 %) 2 (>50 %) 3 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 3.7 +/- 7.5 Average RMSD (Å) : 0.700 +/- 0.200 Consensus geometry
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Consensus Sequence: | XXppXhphX |
(φψ)-conformation: | aalbppbaa |
Pattern: | x | [HPQ] | [FLY] | x | [AKQ] | x | [FKM] | x | [KS] | [EKQ] | [EKP] | [ALP] | [DNT] | [AIP] | [AEK] | [DNS] | [EFL] | [EK] |
Conservation: | -1.016 | 0.214 | 1.075 | -0.770 | -0.032 | -1.016 | -0.524 | -1.262 | 1.059 | 1.321 | 0.337 | -0.893 | 0.583 | -0.893 | -0.032 | 0.952 | -1.139 | 2.037 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i5n_A_100 | 1i5n | A | 100 | 117 | EQLDAYKNSEEPDAASFE | HHHHHHHTT----HHHHH | aaaaaaaalbxxxaaaaa |
1nd7_A_680 | 1nd7 | A | 680 | 697 | LPFYKRMLSKKLTIKDLE | HHHHHHHTT----HHHHH | aaaaaaaavbxxbaaaaa |
1pn9_A_104 | 1pn9 | A | 111 | 128 | YHYPQIFAKQPANPENEK | HHHHHHHH-----HHHHH | aaaaaaaalxwpbaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i5n_A_100 | 1i5n | A | MSESELENOMETHIONINE | E - 100 |
1i5n_A_100 | 1i5n | A | MSESELENOMETHIONINE | Q - 101 |
1i5n_A_100 | 1i5n | A | MSESELENOMETHIONINE | L - 102 |
1i5n_A_100 | 1i5n | A | MSESELENOMETHIONINE | D - 103 |
1i5n_A_100 | 1i5n | A | MSESELENOMETHIONINE | L - 123 |
1i5n_A_100 | 1i5n | A | MSESELENOMETHIONINE | L - 126 |
1i5n_A_100 | 1i5n | A | MSESELENOMETHIONINE | A - 127 |
1i5n_A_100 | 1i5n | A | MSESELENOMETHIONINE | A - 130 |
1pn9_A_104 | 1pn9 | A | GTXS-HEXYLGLUTATHIONE | Y - 105 |
1pn9_A_104 | 1pn9 | A | GTXS-HEXYLGLUTATHIONE | R - 107 |
1pn9_A_104 | 1pn9 | A | GTXS-HEXYLGLUTATHIONE | Y - 113 |
1pn9_A_104 | 1pn9 | A | GTXS-HEXYLGLUTATHIONE | F - 117 |
Clusters included in this Subclass |
CLUSTER: HH.6.127 |