ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.20.1

Subclass Accession number: 4963
Subclass: 6.20.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 35.6 +/- 29.1
Average RMSD (Å) : 0.420 +/- 0.045

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	phcCXXpppX
(φψ)-conformation:	aalbpaabaa

Pattern:	[kl]	x	[lw]	[A]	[ek]	[EKQR]	[ILV]	[AG]	x	[EKNT]	[ALV]	[GN]	[C]	[KNP]	[LTV]	[DGNT]	[DST]	[ADST]	[AES]	x	[LM]	[AIV]	[hq]	[C]	[L]	[KR]	x
Conservation:	-0.595	-1.158	-0.626	0.753	-0.575	-0.041	0.239	0.066	-0.914	-0.489	-0.415	0.474	2.984	-0.421	-0.367	-0.570	-0.278	-0.546	-0.352	-0.758	0.567	-0.274	-0.190	2.984	0.753	0.555	-0.807

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ea5_A_238	1ea5	A	242	268	RRRAVELGRNLNCNLNSDEELIHCLRE	HHHHHHHHHHTT---SSHHHHHHHHHH	aaaaaaaaaaalxxaabaaaaaaaaaa
1f6w_A_233	1f6w	A	234	260	LFWAKKVAEKVGCPVGDAARMAQCLKV	HHHHHHHHHHHT---S-HHHHHHHHHH	aaaaaaaaaaavxwaabaaaaaaaaaa
1k4y_A_261	1k4y	A	261	287	KSLAEKIAIEAGCKTTTSAVMVHCLRQ	HHHHHHHHHHHT---S-HHHHHHHHHH	aaaaaaaaaaavbxaabaaaaaaaaaa
1mx1_A_1262	1mx1	A	1262	1288	KPLAEQIAITAGCKTTTSAVMVHCLRQ	HHHHHHHHHHTT---SSHHHHHHHHHH	aaaaaaaaaaavbxaabaaaaaaaaaa
2bce_*_233	2bce	-	234	260	LFWAKRIAEKVGCPVDDTSKMAGCLKI	HHHHHHHHHHHT---SSHHHHHHHHHH	aaaaaaaaaaavbwaabaaaaaaaaaa

Clusters included in this Subclass