ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.37.1

Subclass Accession number: 4980
Subclass: 6.37.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
SCOP : 53473 (>50 %) 53474 (>50 %)

Number of loops: 3

Average sequence ID (%) : 11.1 +/- 11.9
Average RMSD (Å) : 1.267 +/- 0.462

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 270-315

Consensus Sequence:	XXVXpXhXXX
(φψ)-conformation:	aapappppaa

Pattern:	x	[HLY]	x	[KPQ]	[CQW]	[V]	x	[DKR]	[HP]	[LM]	[PT]	x	x	[DET]	[IMY]	x	[EHN]	x
Conservation:	-0.916	0.089	-1.318	0.089	-0.313	2.199	-1.117	-0.012	1.329	1.488	0.875	-0.916	-0.514	0.189	-0.012	-1.218	0.692	-0.615

Loops included in this Subclass

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bn7_A_183	1bn7	A	ACTACETATE ION	V - 183
1re0_B_248	1re0	B	AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE	Y - 256
1re0_B_248	1re0	B	AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE	I - 259
1re0_B_248	1re0	B	AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE	M - 260
1re0_B_248	1re0	B	AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE	L - 261
1re0_B_248	1re0	B	AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE	T - 263
1re0_B_248	1re0	B	AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE	D - 264
1re0_B_248	1re0	B	AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE	V - 270

Clusters included in this Subclass