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PDB code:

Information on SUBCLASS 7.4.1

Subclass Accession number: 5007 Subclass: 7.4.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 7 Average sequence ID (%) : 40.8 +/- 26.5 Average RMSD (Å) : 0.614 +/- 0.135 Consensus geometry d (Å): 21 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1dps_A_59	1dps	A	59	101	FIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSK	HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------HHHHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaaavxbxbaxaaaaaaa
1ji5_A_35	1ji5	A	35	77	FFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEI	HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------HHHHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaaavxbxxabaaaaaaa
1jig_A_37	1jig	A	37	79	FFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLAT	HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------HHHHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaaavbbxxabaaaaaaa
1moj_A_60	1moj	A	60	102	FRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAE	HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SHHHHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaaavbbwpaxaaaaaaa
1n1q_A_39	1n1q	A	39	81	FFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEE	HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SHHHHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaaavbbxxabaaaaaaa
1o9r_A_48	1o9r	A	48	90	FIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSST	HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SHHHHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaaavxbxbaxaaaaaaa
1qgh_A_39	1qgh	A	39	81	FFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLEN	HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SHHHHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaaavxbxxabaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ji5_A_35	1ji5	A	OF3FERRIC ION, 1 WATER COORDINATED	H - 39
1ji5_A_35	1ji5	A	OF3FERRIC ION, 1 WATER COORDINATED	E - 43
1ji5_A_35	1ji5	A	OF3FERRIC ION, 1 WATER COORDINATED	Y - 46
1ji5_A_35	1ji5	A	MPD2-METHYL-2,4-PENTANEDIOL	I - 53
1ji5_A_35	1ji5	A	OF3FERRIC ION, 1 WATER COORDINATED	D - 54
1ji5_A_35	1ji5	A	OF3FERRIC ION, 1 WATER COORDINATED	E - 58
1ji5_A_35	1ji5	A	MPD2-METHYL-2,4-PENTANEDIOL	M - 71
1ji5_A_35	1ji5	A	MPD2-METHYL-2,4-PENTANEDIOL	Y - 74
1jig_A_37	1jig	A	OF3FERRIC ION, 1 WATER COORDINATED	H - 41
1jig_A_37	1jig	A	OF3FERRIC ION, 1 WATER COORDINATED	E - 42
1jig_A_37	1jig	A	OF3FERRIC ION, 1 WATER COORDINATED	E - 45
1jig_A_37	1jig	A	OF3FERRIC ION, 1 WATER COORDINATED	Y - 48
1jig_A_37	1jig	A	OF3FERRIC ION, 1 WATER COORDINATED	D - 56
1jig_A_37	1jig	A	OF3FERRIC ION, 1 WATER COORDINATED	E - 60
1moj_A_60	1moj	A	FEFE (III) ION	H - 64
1moj_A_60	1moj	A	FEFE (III) ION	D - 79
1moj_A_60	1moj	A	FEFE (III) ION	E - 83
1n1q_A_39	1n1q	A	FEOMU-OXO-DIIRON	H - 43
1n1q_A_39	1n1q	A	FEOMU-OXO-DIIRON	E - 47
1n1q_A_39	1n1q	A	FEOMU-OXO-DIIRON	Y - 50
1n1q_A_39	1n1q	A	FEOMU-OXO-DIIRON	D - 58
1n1q_A_39	1n1q	A	FEOMU-OXO-DIIRON	E - 62
1o9r_A_48	1o9r	A	FEFE (III) ION	H - 52
1o9r_A_48	1o9r	A	FEFE (III) ION	D - 56
1o9r_A_48	1o9r	A	FEFE (III) ION	D - 67
1o9r_A_48	1o9r	A	FEFE (III) ION	E - 71
1qgh_A_39	1qgh	A	FEFE (III) ION	H - 43
1qgh_A_39	1qgh	A	FEFE (III) ION	D - 47
1qgh_A_39	1qgh	A	FEFE (III) ION	D - 58
1qgh_A_39	1qgh	A	FEFE (III) ION	E - 62

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1o9r_A_48	1o9r	A	AC5FE BINDING SITE FOR CHAIN A	D - 67
1o9r_A_48	1o9r	A	AC5FE BINDING SITE FOR CHAIN A	E - 71
1qgh_A_39	1qgh	A	ASAIRON-BINDING SITE	H - 43
1qgh_A_39	1qgh	A	ASAIRON-BINDING SITE	D - 47
1qgh_A_39	1qgh	A	ASAIRON-BINDING SITE	D - 58
1qgh_A_39	1qgh	A	ASAIRON-BINDING SITE	E - 62

Clusters included in this Subclass

CLUSTER: HH.7.21

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