Information on SUBCLASS 2.2.44 |
Subclass Accession number: 514
Subclass: 2.2.44 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.4 +/- 9.9 Average RMSD (Å) : 0.667 +/- 0.289 Consensus geometry
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Consensus Sequence: | XXhpXh |
(φψ)-conformation: | abaabb |
Pattern: | [LTV] | [DEY] | [FK] | [ADG] | [IPW] | [DNR] | x | [IV] | x |
Conservation: | 0.125 | 0.018 | 0.506 | -0.197 | -1.054 | 0.339 | -1.054 | 2.156 | -0.840 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a28_A_776 | 1a28 | A | 776 | 784 | LYFAPDLIL | EEEETTEEE | xxabaabbb |
1k9x_A_241 | 1k9x | A | 242 | 250 | TEFGIRDVR | EEEETTEEE | bbabaabbb |
1nnx_A_84 | 1nnx | A | 90 | 98 | VDKDWNSVE | EEEETTEEE | xbbbaabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a28_A_776 | 1a28 | A | STRPROGESTERONE | Y - 777 |
1a28_A_776 | 1a28 | A | STRPROGESTERONE | F - 778 |
Clusters included in this Subclass |
CLUSTER: HA.1.105 |