Information on SUBCLASS 25.1.1 |
Subclass Accession number: 5180
Subclass: 25.1.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>50 %) 3.1.1 (>50 %) 3.1.1.43.4 (>75 %) 3.4.24 (>75 %) 3.4.24.35 GO : GO:0004175 (>75 %) GO:0004222 (>75 %) GO:0005509 (>50 %) GO:0005509 (>75 %) GO:0008233 (>75 %) GO:0008237 (>75 %) GO:0008270 (>75 %) GO:0016298 (>50 %) GO:0016788 (>50 %) GO:0016789 (>50 %) SCOP : 48618 (>75 %) 48619 (>75 %) 48623 (>75 %) 55485 (>75 %) 55486 (>75 %) 55528 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 57.7 +/- -0.5 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | ChGXRXhXXYhcYGChCGXGGpGpPXDXh |
(φψ)-conformation: | aabappaaaaabbeaapepeebeppabaa |
Pattern: | [IL] | [IKL] | [EQ] | [FL] | [AK] | [GN] | [MT] | [IV] | [GQ] | [C] | [AV] | [G] | [PT] | [R] | [PT] | [PW] | [IT] | [AS] | [Y] | [IMV] | [GKN] | [Y] | [G] | [C] | [FY] | [C] | [G] | x | [G] | [G] | [HS] | [G] | [QT] | [P] | x | [D] | [AE] | [IL] | [D] | [RW] | [C] | [C] | [HY] | [GT] | [H] | [D] | [CHN] | [C] | [Y] | [NT] | [EKR] | [A] |
Conservation: | -0.500 | -1.358 | -0.306 | -0.661 | -0.964 | -0.495 | -0.881 | -0.308 | -0.990 | 1.812 | -0.883 | 0.655 | -0.715 | 0.269 | -0.713 | -0.624 | -0.964 | -0.665 | 1.041 | -0.673 | -1.101 | 1.041 | 0.655 | 1.812 | 0.191 | 1.812 | 0.655 | -1.401 | 0.655 | 0.655 | -0.744 | 0.655 | -0.881 | 1.041 | -1.375 | 0.655 | -0.964 | -0.500 | 0.655 | -0.768 | 1.812 | 1.812 | 0.165 | -0.990 | 1.426 | 0.655 | -1.101 | 1.812 | 1.041 | -0.578 | -0.759 | -0.116 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fe5_A_2 | 1fe5 | A | 2 | 53 | LIQFKNMIQCAGTRPWTAYVNYGCYCGKGGSGTPVDELDRCCYTHDNCYNEA | HHHHHHHHHHH-SS-GGGGTTBTTTBSSS--S---SHHHHHHHHHHHHHHHH | aaaaaaaaaaabaxwaaaaabbeaaxepeebebpabaaaaaaaaaaaaaaaa |
1g0z_A_2 | 1g0z | A | 2 | 53 | LKQFKNMIQCAGTRTWTSYIGYGCYCGYGGSGTPVDELDRCCYTHDHCYNKA | HHHHHHHHHHHSSS-GGGGSSBTTTSSS---S---SHHHHHHHHHHHHHHHH | aaaaaaaaaaabaxxaaaaabbeaaxexeebexpabaaaaaaaaaaaaaaaa |
1le6_A_2 | 1le6 | A | 2 | 53 | ILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRA | HHHHHHHHHHHSSS-GGGGSSBTTTBSSS--S---SHHHHHHHHHHHHHHHH | aaaaaaaaaaaxabpaaaaabbeaaxepeebexpabaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fe5_A_2 | 1fe5 | A | CACALCIUM ION | G - 30 |
1fe5_A_2 | 1fe5 | A | CACALCIUM ION | G - 33 |
1le6_A_2 | 1le6 | A | MPD2-METHYL-2,4-PENTANEDIOL | I - 18 |
1le6_A_2 | 1le6 | A | MPD2-METHYL-2,4-PENTANEDIOL | M - 21 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | C - 25 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | F - 26 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | C - 27 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | G - 28 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | L - 29 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | G - 31 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | C - 43 |
1le6_A_2 | 1le6 | A | CACALCIUM ION | D - 47 |
Clusters included in this Subclass |
CLUSTER: HH.24.0 |