Information on SUBCLASS 12.1.1 |
Subclass Accession number: 55
Subclass: 12.1.1 Type: EH beta-alpha DB: ArchDB-KI |
Number of loops: 3 Average sequence ID (%) : 60.4 +/- 0.4 Average RMSD (Å) : 0.59 +/- 0.05 Consensus geometry
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Consensus Sequence: | HLGpPpGpXXXphpLX |
(φψ)-conformation: | bbeballbpbaaapaa |
Pattern: | [KY] | [V] | [IV] | [L] | [AL] | [S] | [H] | [L] | [G] | [QR] | [P] | [KN] | [G] | [EK] | x | x | x | [EK] | [FLY] | [RS] | [L] | x | [AP] | [V] | [A] | [K] | [ER] | [L] | x | [ES] | [L] | [L] |
Conservation: | -0.837 | 0.351 | 0.069 | 0.351 | -1.034 | 0.351 | 2.655 | 0.351 | 1.503 | -0.203 | 2.079 | -0.378 | 1.503 | -0.190 | -1.825 | -1.569 | -0.548 | -0.203 | -0.609 | -0.947 | 0.351 | -1.128 | -0.450 | 0.351 | 0.351 | 0.927 | -0.485 | 0.351 | -1.249 | -0.592 | 0.351 | 0.351 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1php_*_53 | 1php | - | 53 | 84 | KVILASHLGRPKGKVVEELRLDAVAKRLGELL | EEEEE---S---SS--GGG-SHHHHHHHHHHH | bxbxbbbbebalvbxbaaaxaaaaaaaaaaaa |
1qpg_*_56 | 1qpg | - | 56 | 87 | YVVLASHLGQPNGERNEKYSLAPVAKELQSLL | EEEEE---S---SS--GGG-SHHHHHHHHHHH | bbbbbbbbebavlbxbaaaxaaaaaaaaaaaa |
1vpe_*_53 | 1vpe | - | 53 | 84 | KVILLSHLGRPKGEPSPEFSLAPVAKRLSELL | EEEEE---S---SS--GGG-SHHHHHHHHHHH | bbbbbbbbebxagb-baaaxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qpg_*_56 | 1qpg | * | 3PG3-PHOSPHOGLYCERIC ACID | S - 61 |
1qpg_*_56 | 1qpg | * | 3PG3-PHOSPHOGLYCERIC ACID | H - 62 |
1qpg_*_56 | 1qpg | * | 3PG3-PHOSPHOGLYCERIC ACID | G - 64 |
1vpe_*_53 | 1vpe | * | 3PG3-PHOSPHOGLYCERIC ACID | H - 59 |
1vpe_*_53 | 1vpe | * | 3PG3-PHOSPHOGLYCERIC ACID | G - 61 |
1vpe_*_53 | 1vpe | * | 3PG3-PHOSPHOGLYCERIC ACID | R - 62 |
Clusters included in this Subclass |
CLUSTER: EH.15.0 |