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Information on SUBCLASS 3.6.10
Subclass Accession number: 5519
Subclass: 3.6.10 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 14.6 +/- 13.4
Average RMSD (Å) : 0.933 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXXNhX
(φψ)-conformation: aapaabb
Pattern: [AEL][HP][ALV]x[AER]x[AL][GKL][HPQ]x[EKP][N][IV]x[AL][CFI]
Conservation:-0.8560.931-0.192-0.487-0.339-0.7820.083-1.151-0.044-0.8560.0302.9071.276-0.4870.083-0.118
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f6d_A_2491f6d   A253268EPVNRILGHVKNVILIHHHHHHHTT-TTEEEEaaaaaaaaaxaabbxb
1jy1_A_2321jy1   A236251AHLHAQAKPYENISLCHHHHHHHTT-TTEEEEaaaaaaaaabaabbbb
2oat_A_2122oat   A212227LPALERALQDPNVAAFHHHHHHHTTSTTEEEEaaaaaaaaaxaaxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2oat_A_2122oat   A     PFM1-AMINO-7-(2-METHYL-3-OXIDO-5-((PHOSPHONOXY)METHYL)-4-PYRIDOXAL-5-OXO-6-HEPTENATE M - 228

Clusters included in this Subclass
CLUSTER: HE.5.373