Information on SUBCLASS 4.4.4 |
Subclass Accession number: 5619
Subclass: 4.4.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 29.3 +/- 22.9 Average RMSD (Å) : 0.371 +/- 0.250 Consensus geometry
|
Consensus Sequence: | XXGXhpXh |
(φψ)-conformation: | aagababb |
Pattern: | [aw] | [ilv] | [AGN] | [dhqsy] | [AIT] | x | [ADNR] | [IKLM] | [IV] | [AEGKQR] | x | [G] | x | [AIV] | [ADKQ] | [AIKLTV] | [AGMV] | [ILV] | [ACIV] | [GLVY] | [GS] |
Conservation: | -0.441 | -0.045 | 0.241 | -0.673 | 0.072 | -1.041 | -0.292 | 0.104 | 1.389 | -0.445 | -1.151 | 2.933 | -1.125 | 0.249 | -0.007 | -0.747 | -0.408 | 0.754 | -0.020 | -0.942 | 1.595 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1afw_A_127 | 1afw | A | 131 | 151 | AVNDIANKIKVGQIDIGLALG | HHHHHHHHHHTTS-SEEEEEE | aaaaaaaaaaavababbbbbb |
1e5m_A_169 | 1e5m | A | 173 | 193 | AIGDAFRLVQNGYAKAMICGG | HHHHHHHHHHTTS-SEEEEEE | aaaaaaaaaaavababbxbeb |
1hzp_A_114 | 1hzp | A | 118 | 138 | ALGAAADMIRGGGAATMLVVG | HHHHHHHHHHTTS-SEEEEEE | aaaaaaaaaaavababbbbbx |
1j3n_A_163 | 1j3n | A | 167 | 187 | ALGSALRMIQLGEADLVLAGG | HHHHHHHHHHTTS-SEEEEEE | aaaaaaaaaaavababbxbeb |
1kas_*_165 | 1kas | - | 169 | 189 | NIGHAARIIAYGDADVMVAGG | HHHHHHHHHHHTS-SEEEEEE | aaaaaaaaaaagababbxbeb |
1ub7_A_112 | 1ub7 | A | 116 | 136 | ALAQAHALVEAGLAQKVLAVG | HHHHHHHHHHTTS-SEEEEEE | aaaaaaaaaaavababbxbbb |
1ypr_A_2 | 1ypr | A | 2 | 22 | WQAYTDNLIGTGKVDKAVIYS | HHHHHHHHHHTSS-SEEEEEE | aaaaaaaaaaavababbbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hzp_A_114 | 1hzp | A | GOLGLYCEROL | K - 141 |
1ub7_A_112 | 1ub7 | A | CEAS-HYDROXY-CYSTEINE | G - 112 |
1ub7_A_112 | 1ub7 | A | CEAS-HYDROXY-CYSTEINE | W - 113 |
1ub7_A_112 | 1ub7 | A | CEAS-HYDROXY-CYSTEINE | I - 114 |
1ub7_A_112 | 1ub7 | A | GOLGLYCEROL | H - 121 |
1ub7_A_112 | 1ub7 | A | GOLGLYCEROL | E - 125 |
1ub7_A_112 | 1ub7 | A | GOLGLYCEROL | G - 127 |
1ub7_A_112 | 1ub7 | A | GOLGLYCEROL | L - 128 |
1ub7_A_112 | 1ub7 | A | GOLGLYCEROL | A - 129 |
1ub7_A_112 | 1ub7 | A | CEAS-HYDROXY-CYSTEINE | E - 138 |
Clusters included in this Subclass |
CLUSTER: HE.4.144 |