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Information on SUBCLASS 4.42.1
Subclass Accession number: 5699
Subclass: 4.42.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 9.1 +/- 9.3
Average RMSD (Å) : 1.000 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXXXcXXX
(φψ)-conformation: aababpbb
Pattern: [KNW]x[TV]xx[EKP][DG]x[PS]xx
Conservation:-0.271-0.8221.151-0.601-0.3810.5001.684-0.9320.933-1.262-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dz4_A_3601dz4   A374383WLTRIPDFSI.HHHH----EE.aaaababbbx.
1itw_A_1351itw   A135145NPVLREGNSDRHHHH--B-EEEaaaaxabxbbb
1ne9_A_3001ne9   A305315KHVFVKDAPREHHHH--S--EEaaaabaxxxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 360
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 362
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 363
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 366
1dz4_A_3601dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 367
1dz4_A_3601dz4   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL L - 375
1dz4_A_3601dz4   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL P - 379
1dz4_A_3601dz4   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL D - 380
1dz4_A_3601dz4   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL F - 381
1itw_A_1351itw   A     ICIISOCITRIC ACID N - 135
1itw_A_1351itw   A     ICIISOCITRIC ACID P - 136
1itw_A_1351itw   A     ICIISOCITRIC ACID R - 139
1itw_A_1351itw   A     MNMANGANESE (II) ION R - 145
1itw_A_1351itw   A     ICIISOCITRIC ACID R - 145
1ne9_A_3001ne9   A     MGMAGNESIUM ION V - 307
1ne9_A_3001ne9   A     MGMAGNESIUM ION F - 308
1ne9_A_3001ne9   A     MGMAGNESIUM ION V - 309
1ne9_A_3001ne9   A     MGMAGNESIUM ION K - 310
1ne9_A_3001ne9   A     MGMAGNESIUM ION D - 311

Clusters included in this Subclass
CLUSTER: HE.4.367