Information on SUBCLASS 4.68.1 |
Subclass Accession number: 5728
Subclass: 4.68.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.2 GO : GO:0004553 (>75 %) GO:0016160 (>75 %) GO:0016798 (>75 %) SCOP : 51445 (>75 %) 51446 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 18.0 Average RMSD (Å) : 0.933 +/- 0.231 Consensus geometry
|
Consensus Sequence: | pXXchphX |
(φψ)-conformation: | aaNlppbb |
Pattern: | [GVY] | [ACN] | [GS] | [AGL] | [A] | x | x | [AEG] | [AK] | [FKY] | [FLW] | [AE] | [KQ] | x | [GST] | [GN] | [ILV] | [EK] | [IV] | [TV] | [ALV] | x |
Conservation: | -1.286 | -0.717 | 0.937 | -1.191 | 1.847 | -1.191 | -0.907 | -0.717 | 0.308 | -0.242 | 0.233 | 0.032 | 1.110 | -1.191 | -0.337 | 1.169 | 0.707 | 1.110 | 1.449 | 0.596 | -0.432 | -1.286 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jnr_A_32 | 1jnr | A | 34 | 55 | GCGAAYEAAYWAKLGGLKVTLV | HHHHHHHHHHHHTTTT--EEEE | aaaaaaaaaaaaaaalxxbbbb |
1r53_A_130 | 1r53 | A | 133 | 154 | VASGAIAEKFLAQNSNVEIVAF | HHHHHHHHHHHHHTT--EEEEE | aaaaaaaaaaaaaaNlpbbbbb |
3mbp_*_17 | 3mbp | - | 17 | 38 | YNGLAEVGKKFEKDTGIKVTVE | HHHHHHHHHHHHTTTS--EEEE | aaaaaaaaaaaaaaNvxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jnr_A_32 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 32 |
1jnr_A_32 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 33 |
1jnr_A_32 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 34 |
1jnr_A_32 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 55 |
Clusters included in this Subclass |
CLUSTER: HE.5.365 |