ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 29.1.1

Subclass Accession number: 6029
Subclass: 29.1.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.1 (>75 %)  3.1 (>75 %)  3.1.1 (>75 %)  3.1.1 (>75 %)  3.1.1.3 (>75 %)  3.1.1.3
GO : GO:0016298 (>75 %)  GO:0016298 (>75 %)  GO:0016788 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0016789 (>75 %)
SCOP : 53473 (>75 %)  53473 (>75 %)  53474 (>75 %)  53474 (>75 %)  53577 (>75 %)  53577 (>75 %)

Number of loops: 4

Average sequence ID (%) : 62.9 +/- 12.4
Average RMSD (Å) : 0.350 +/- 0.100

Consensus geometry

d (Å): 17

delta (°): 135-180

theta (°): 0-45

rho (°): 225-270

Consensus Sequence:	pXpcCFPCPXpGCPpMGHhADphXGKTXXVXQp
(φψ)-conformation:	aalaabwppaaebpppeaaaaapaaaaabblpp

Pattern:	[Y]	[DENS]	x	[F]	[QT]	[AEQ]	[NS]	[DGK]	[C]	[F]	[P]	[C]	[PS]	[AES]	[EGK]	[G]	[C]	[P]	[KQ]	[M]	[G]	[H]	[FY]	[A]	[D]	[QR]	[FY]	[EP]	[G]	[KR]	[T]	[AKN]	[ADGT]	[V]	[EG]	[Q]	[KLT]	[FV]	[FY]	[L]
Conservation:	1.126	-0.971	-1.451	0.722	-0.892	-1.118	-0.355	-1.309	1.935	0.722	1.126	1.935	-0.556	-1.103	-1.212	0.722	1.935	1.126	-0.489	0.318	0.722	1.531	0.301	-0.087	0.722	-0.489	0.215	-0.517	0.722	-0.250	0.318	-1.246	-1.477	-0.087	-1.003	0.318	-1.388	-0.730	0.301	-0.087

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bu8_A_288	1bu8	A	288	327	YEKFQQNDCFPCPEEGCPKMGHYADQFEGKTATVEQTVYL	HHHHHTT-S-S--TT---BSSGGGGG-TTTTSSSSEEEEE	aaaaaavblbwpxaaebxxxeaaaaaxaaaaabbvxxbbb
1gpl_*_288	1gpl	-	288	327	YDEFQESGCFPCPAKGCPKMGHFADQYPGKTNAVEQTFFL	HHHHHTT-S-S--TT---BSSTTGGG-TTTTSSSSEEEEE	aaaaaalaabwxxaaexxxxeaaaaaxaaaaabbvxxbbb
1hpl_A_288	1hpl	A	288	327	YSDFTANKCFPCSSEGCPQMGHYADRFPGRTKGVGQLFYL	HHHHHTT-S-S--TT---BSSTTGGG-TTTTSSSSEEEEE	aaaaaavaabwxpaaexxxxeaaaaaxaaaaabbvxxbbb
1lpb_B_288	1lpb	B	288	327	YNVFTANKCFPCPSGGCPQMGHYADRYPGKTNDVGQKFYL	HHHHHTT-S-S--TT---BSSTTGGG-TTTTSSSSEEEEE	aaaaaavaabwxxxgebxxxeaaaaaxaaaaabbvxxbbb

Clusters included in this Subclass