Information on SUBCLASS 2.4.5 |
Subclass Accession number: 6132
Subclass: 2.4.5 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 11.7 +/- 21.5 Average RMSD (Å) : 0.533 +/- 0.197 Consensus geometry
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Consensus Sequence: | Xphcph |
(φψ)-conformation: | abplbb |
Pattern: | [RSTY] | [aeks] | [AEPQS] | [ARST] | [LPVY] | [AGN] | [ehk] | [fvwy] | [dsy] | [cgil] | [agpvy] | x |
Conservation: | 0.031 | -0.171 | 0.453 | 1.240 | -0.207 | 2.133 | 0.269 | 0.166 | -0.608 | -1.367 | -1.426 | -0.513 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gbg_*_47 | 1gbg | - | 52 | 63 | TSPSYNKFDCGE | EEEETTEEEEEE | bbabplbbbbbb |
1i2m_A_39 | 1i2m | A | 39 | 50 | YVATLGVEVHPL | EEEETTEEEEEE | bxabpUbxbbwb |
1jqz_A_44 | 1jqz | A | 47 | 58 | SAESVGEVYIKS | EESSTTEEEEEE | bbabpvbbbbbx |
1m3q_A_48 | 1m3q | A | 48 | 59 | REQSPAHWSGVL | EEEETTEEEEEE | bxabpvbbbexb |
1sac_A_57 | 1sac | A | 64 | 75 | YKERVGEYSLYI | EEEETTEEEEEE | bbabpvbbbbbb |
2ayh_*_47 | 2ayh | - | 52 | 63 | TSSAYNKFDCAE | EEEETTEEEEEE | bbabpvbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1sac_A_57 | 1sac | A | CACALCIUM ION | D - 58 |
1sac_A_57 | 1sac | A | CACALCIUM ION | N - 59 |
1sac_A_57 | 1sac | A | CACALCIUM ION | L - 62 |
Clusters included in this Subclass |
CLUSTER: HA.3.92 |