Information on SUBCLASS 4.1.27 |
Subclass Accession number: 6262
Subclass: 4.1.27 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 51293 (>75 %) 51294 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 16.7 +/- 0.0 Average RMSD (Å) : 0.500 +/- 0.000 Consensus geometry
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Consensus Sequence: | XDhEpcph |
(φψ)-conformation: | bbaaalbp |
Pattern: | [QY] | [V] | [KL] | [SV] | [FR] | [D] | [PV] | [E] | [ST] | [GK] | [ER] | [LV] | x | [KP] | [GQ] | [KR] | [V] | [NV] | [KV] | [IV] | [GW] | [KS] | [VY] | [ER] |
Conservation: | -0.024 | 1.118 | -0.976 | -1.166 | -0.976 | 2.641 | -0.595 | 1.880 | 0.167 | -0.595 | -0.024 | -0.024 | -1.356 | -0.024 | -0.595 | 0.738 | 1.118 | -1.166 | -0.976 | 0.738 | 0.547 | -0.214 | -0.214 | -0.024 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1at0_*_354 | 1at0 | - | 354 | 377 | QVLVRDVETGELRPQRVVKVGSVR | EEEEE-TTT--EEEEEEEEEEEEE | bbxbxxaaavxxbwbxxabbbbbb |
1dq3_A_52 | 1dq3 | A | 52 | 75 | YVKSFDPESKRVVKGKVNVIWKYE | EEEEEETTTTEEEEEEEEEEEEEE | bbxbbbaaavbxbxbxxabbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1at0_*_354 | 1at0 | * | MSESELENOMETHIONINE | L - 356 |
1at0_*_354 | 1at0 | * | MSESELENOMETHIONINE | L - 365 |
1at0_*_354 | 1at0 | * | MSESELENOMETHIONINE | R - 377 |
Clusters included in this Subclass |
CLUSTER: HA.5.255 |