Information on SUBCLASS 2.2.2 |
Subclass Accession number: 63
Subclass: 2.2.2 Type: HA beta-beta hairpin DB: ArchDB-KI |
Number of loops: 6 Average sequence ID (%) : 41.0 +/- 4.4 Average RMSD (Å) : 0.50 +/- 0.12 Consensus geometry
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Consensus Sequence: | pGXhGV |
(φψ)-conformation: | bbaaeb |
Pattern: | [FY] | [DKQR] | {ILV} | {GLV} | [ER] | [EKR] | [IL] | [G] | [EST] | [G] | x | [FY] | [G] | {V} | [IV] | {HY} | {EKR} | [ACGV] | {TV} | [DEN] |
Conservation: | 1.248 | -0.695 | -0.892 | -1.593 | -0.097 | -0.141 | 0.157 | 1.650 | -0.584 | 1.650 | -0.427 | 1.050 | 1.650 | -0.737 | 0.386 | 0.402 | -1.017 | -1.137 | -0.766 | -0.107 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b38_A_4 | 1b38 | A | 4 | 23 | FQKVEKIGEGTYGVVYKARN | EEEEEEEEE-SS-EEEEEEE | bbxabxaebbaaexbbxbbx |
1cki_A_12 | 1cki | A | 12 | 31 | YRLGRKIGSGSFGDIYLGTD | EEEEEEEEE-SSSEEEEEEE | xxxbpxaebbaaebbbxbbx |
1hcl_*_4 | 1hcl | - | 4 | 23 | FQKVEKIGEGTYGVVYKARN | EEEEEEEEE-SSSEEEEEEE | bxxabxaebxaaexbbxbbx |
1koa_*_5942 | 1koa | - | 5942 | 5961 | YDIHEELGTGAFGVVHRVTE | EEEEEEEEEETTEEEEEEEE | bbxbpxabbbaaexbbxbbx |
1kob_A_53 | 1kob | A | 53 | 72 | YDILEELGSGAFGVVHRCVE | EEEEEEEEEETTEEEEEEEE | bbxbxxabbbaaebbbxbbx |
2csn_*_12 | 2csn | - | 12 | 31 | YKVGRRIGEGSFGVIFEGTN | EEEEEEEEEETTEEEEEEEE | bxxFbxabbbaaebbbxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | I - 10 |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | G - 11 |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | E - 12 |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | G - 13 |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | T - 14 |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | Y - 15 |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | G - 16 |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | V - 17 |
1b38_A_4 | 1b38 | A | ATPADENOSINE-5'-TRIPHOSPHATE | V - 18 |
2csn_*_12 | 2csn | * | CKIN-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE | I - 18 |
2csn_*_12 | 2csn | * | CKIN-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE | G - 19 |
2csn_*_12 | 2csn | * | CKIN-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE | E - 20 |
2csn_*_12 | 2csn | * | CKIN-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE | I - 26 |
Bibliographic annotations |
Clusters included in this Subclass |
CLUSTER: HA.3.13 |