Information on SUBCLASS 4.52.1 |
Subclass Accession number: 6339
Subclass: 4.52.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 5.6 +/- 0.0 Average RMSD (Å) : 0.900 +/- 0.000 Consensus geometry
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Consensus Sequence: | XhpcphXh |
(φψ)-conformation: | bbplbpbb |
Pattern: | x | [ST] | [I] | x | [FY] | [EK] | [DN] | [DS] | [FG] | [AN] | [AY] | [KP] | [LT] | x | [AI] | [EL] | x | [KT] |
Conservation: | -0.802 | 0.551 | 1.678 | -0.576 | 2.355 | 0.777 | 1.227 | 0.326 | -0.576 | -0.576 | -0.351 | 0.326 | -0.351 | -1.253 | -0.576 | -1.253 | -0.802 | -0.125 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i4u_A_93 | 1i4u | A | 93 | 110 | LSIDYENSFAAPLVILET | EEEEETTS-EEEEEEEEE | xxbbbplbxbbwbbxabb |
1oxd_A_92 | 1oxd | A | 96 | 113 | RTIFFKDDGNYKTRAEVK | EEEEETTS-EEEEEEEEE | bbbxxplbxbbbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i4u_A_93 | 1i4u | A | MPD2-METHYL-2,4-PENTANEDIOL | I - 95 |
1i4u_A_93 | 1i4u | A | MPD2-METHYL-2,4-PENTANEDIOL | Y - 97 |
1i4u_A_93 | 1i4u | A | MPD2-METHYL-2,4-PENTANEDIOL | S - 100 |
1i4u_A_93 | 1i4u | A | MPD2-METHYL-2,4-PENTANEDIOL | F - 101 |
1i4u_A_93 | 1i4u | A | MPD2-METHYL-2,4-PENTANEDIOL | A - 102 |
1i4u_A_93 | 1i4u | A | MPD2-METHYL-2,4-PENTANEDIOL | A - 103 |
1i4u_A_93 | 1i4u | A | MPD2-METHYL-2,4-PENTANEDIOL | P - 104 |
1i4u_A_93 | 1i4u | A | MPD2-METHYL-2,4-PENTANEDIOL | L - 105 |
1oxd_A_92 | 1oxd | A | NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE | Y - 92 |
1oxd_A_92 | 1oxd | A | NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE | Q - 94 |
1oxd_A_92 | 1oxd | A | NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE | R - 96 |
1oxd_A_92 | 1oxd | A | NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE | A - 110 |
1oxd_A_92 | 1oxd | A | NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE | V - 112 |
Clusters included in this Subclass |
CLUSTER: HA.3.257 |