ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.22.1

Subclass Accession number: 6859
Subclass: 6.22.1

Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 42.7 +/- 11.7
Average RMSD (Å) : 0.333 +/- 0.058

Consensus geometry

d (Å): 5

delta (°): 0-45

theta (°): 90-135

rho (°): 270-315

Consensus Sequence:	ITNXhpAphX
(φψ)-conformation:	pplaaapabb

Pattern:	[EHS]	[WY]	[IV]	[IL]	[N]	[G]	[NQT]	[K]	[AFM]	[W]	[I]	[T]	[N]	[GS]	[GPW]	[DEK]	[A]	[DNS]	[AVW]	[LTY]	[FIV]	[LV]	[FLY]	[A]	[KRS]
Conservation:	-0.757	0.782	0.044	-0.160	1.113	1.113	-0.805	0.681	-1.045	3.270	0.250	0.681	1.113	-0.257	-1.093	-0.518	0.250	-0.518	-1.141	-1.093	-0.613	-0.365	-0.470	0.250	-0.709

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ivh_A_157	1ivh	A	157	181	HYILNGNKFWITNGPDADVLIVYAK	EEEEEEEEEEEETGGG-SEEEEEEE	bbbxbebbbvxxvaaaxabbbbbbx
1jqi_A_152	1jqi	A	152	176	SWVLNGTKAWITNSWEASATVVFAS	EEEEEEEEEEEETTTT-SEEEEEEE	bbbxbebbblxxvaaaxabbbbbbx
1udy_A_157	1udy	A	157	181	EYIINGQKMWITNGGKANWYFLLAR	EEEEEEEEEEEETTTT-SEEEEEEE	bbxbbebbbvxxlaaaxabbxbbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ivh_A_157	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	F - 165
1ivh_A_157	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	W - 166
1ivh_A_157	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 167
1ivh_A_157	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	T - 168
1ivh_A_157	1ivh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	N - 169
1jqi_A_152	1jqi	A	FADFLAVIN-ADENINE DINUCLEOTIDE	A - 160
1jqi_A_152	1jqi	A	CAAACETOACETYL-COENZYME A	W - 161
1jqi_A_152	1jqi	A	FADFLAVIN-ADENINE DINUCLEOTIDE	W - 161
1jqi_A_152	1jqi	A	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 162
1jqi_A_152	1jqi	A	CAAACETOACETYL-COENZYME A	T - 163
1jqi_A_152	1jqi	A	FADFLAVIN-ADENINE DINUCLEOTIDE	T - 163
1jqi_A_152	1jqi	A	FADFLAVIN-ADENINE DINUCLEOTIDE	N - 164
1udy_A_157	1udy	A	FADFLAVIN-ADENINE DINUCLEOTIDE	M - 165
1udy_A_157	1udy	A	CS83-THIAOCTANOYL-COENZYME A	T - 168

Clusters included in this Subclass