ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 10.2.1

Subclass Accession number: 6905
Subclass: 10.2.1

Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 83.5 +/- 2.2
Average RMSD (Å) : 0.640 +/- 0.391

Consensus geometry

d (Å): 17

delta (°): 45-90

theta (°): 90-135

rho (°): 135-180

Consensus Sequence:	YTNHTVhPEALERW
(φψ)-conformation:	bbpabapaaappbb

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	-0.940	-0.335	0.994	0.108	0.551	1.437	0.108	-0.988	-0.962	-0.914	0.108	-0.335	-0.335	0.108	-0.545	2.766	-0.830

Loops included in this Subclass

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1em6_A_371	1em6	A	NBG1-N-ACETYL-BETA-D-GLUCOSAMINE	T - 375
1em6_A_371	1em6	A	NBG1-N-ACETYL-BETA-D-GLUCOSAMINE	N - 376
1em6_A_371	1em6	A	NBG1-N-ACETYL-BETA-D-GLUCOSAMINE	H - 377
1em6_A_371	1em6	A	NBG1-N-ACETYL-BETA-D-GLUCOSAMINE	T - 378
1em6_A_371	1em6	A	NBG1-N-ACETYL-BETA-D-GLUCOSAMINE	V - 379
1em6_A_371	1em6	A	NBG1-N-ACETYL-BETA-D-GLUCOSAMINE	L - 380
1em6_A_371	1em6	A	NBG1-N-ACETYL-BETA-D-GLUCOSAMINE	A - 383
1h5u_A_371	1h5u	A	GLCGLUCOSE	T - 375
1h5u_A_371	1h5u	A	GLCGLUCOSE	N - 376
1h5u_A_371	1h5u	A	GLCGLUCOSE	H - 377
1h5u_A_371	1h5u	A	GLCGLUCOSE	T - 378
1l5r_A_371	1l5r	A	RBFRIBOFLAVINE	L - 380
1l5r_A_371	1l5r	A	RBFRIBOFLAVINE	E - 382
1l5w_A_340	1l5w	A	GLCGLUCOSE	H - 345
1l5w_A_340	1l5w	A	PO4PHOSPHATE ION	H - 345
1l5w_A_340	1l5w	A	GLCGLUCOSE	T - 346
1l5w_A_340	1l5w	A	GLCGLUCOSE	M - 348
1l5w_A_340	1l5w	A	GLCGLUCOSE	P - 349
1l5w_A_340	1l5w	A	GLCGLUCOSE	E - 350
1l5w_A_340	1l5w	A	GLCGLUCOSE	A - 351
1l5w_A_340	1l5w	A	GLCGLUCOSE	E - 353

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1h5u_A_371	1h5u	A	GLCGLC BINDING SITE FOR CHAIN A	H - 377

Clusters included in this Subclass