Information on SUBCLASS 5.6.2 |
Subclass Accession number: 723
Subclass: 5.6.2 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 10.3 +/- 11.0 Average RMSD (Å) : 1.133 +/- 0.379 Consensus geometry
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Consensus Sequence: | hphXXhXXX |
(φψ)-conformation: | bbpabaabb |
Pattern: | [LV] | [GLY] | [DQR] | [GP] | [KPT] | x | [AP] | [EGN] | x | x | [VY] | [ILV] | x |
Conservation: | 1.071 | -1.342 | 0.035 | 1.285 | -0.283 | -1.130 | 1.430 | -0.071 | -0.601 | -1.130 | 0.561 | 1.094 | -0.918 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cfb_*_721 | 1cfb | - | 721 | 733 | VGQGTEPNNLVIS | EEE-SSTT-EEEE | bbbxabaabbbxb |
1iuj_A_35 | 1iuj | A | 40 | 52 | VLRPKNPGDPYVV | EE--SSTTS-EEE | bbxxaxaabxxbx |
1pmi_*_347 | 1pmi | - | 350 | 362 | LYDPPIAEFSVLQ | EE--SSSS-EEEE | xbbxabaabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iuj_A_35 | 1iuj | A | ZNZINC ION | V - 52 |
Clusters included in this Subclass |
CLUSTER: HA.7.60 |