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Information on SUBCLASS 4.60.1
Subclass Accession number: 7427
Subclass: 4.60.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 57.1 +/- -3.5
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: hNNpGYTh
(φψ)-conformation: ppalepaa
Pattern: [IY][IL][FL][LV][IL][N][N][DEY][G][Y][T][IV][E]x
Conservation:-0.921-0.432-0.570-0.681-0.4321.0971.097-1.3081.0971.6120.581-0.1830.581-1.537
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ovm_A_4561ovm   A456469IILVLNNEGYTVEREEEEEESSS-HHHHbxbbxxalexaaaa
1pvd_A_4651pvd   A465478YLFVLNNDGYTIEKEEEEEESSS-HHHHbbxbxxalexaaaa
1zpd_A_4611zpd   A461474IIFLINNYGYTIEVEEEEEE-SS-HHHHxbxxxxalexaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ovm_A_4561ovm   A     TPPTHIAMINE DIPHOSPHATE L - 460
1ovm_A_4561ovm   A     MGMAGNESIUM ION L - 460
1ovm_A_4561ovm   A     MGMAGNESIUM ION N - 461
1ovm_A_4561ovm   A     TPPTHIAMINE DIPHOSPHATE N - 462
1ovm_A_4561ovm   A     MGMAGNESIUM ION N - 462
1ovm_A_4561ovm   A     MGMAGNESIUM ION E - 463
1ovm_A_4561ovm   A     TPPTHIAMINE DIPHOSPHATE G - 464
1ovm_A_4561ovm   A     MGMAGNESIUM ION G - 464
1ovm_A_4561ovm   A     TPPTHIAMINE DIPHOSPHATE Y - 465
1ovm_A_4561ovm   A     MGMAGNESIUM ION Y - 465
1ovm_A_4561ovm   A     TPPTHIAMINE DIPHOSPHATE T - 466
1ovm_A_4561ovm   A     MGMAGNESIUM ION T - 466
1ovm_A_4561ovm   A     TPPTHIAMINE DIPHOSPHATE V - 467
1ovm_A_4561ovm   A     TPPTHIAMINE DIPHOSPHATE E - 468
1pvd_A_4651pvd   A     TPPTHIAMINE DIPHOSPHATE L - 469
1pvd_A_4651pvd   A     MGMAGNESIUM ION L - 469
1pvd_A_4651pvd   A     MGMAGNESIUM ION N - 470
1pvd_A_4651pvd   A     TPPTHIAMINE DIPHOSPHATE N - 471
1pvd_A_4651pvd   A     MGMAGNESIUM ION N - 471
1pvd_A_4651pvd   A     MGMAGNESIUM ION D - 472
1pvd_A_4651pvd   A     TPPTHIAMINE DIPHOSPHATE G - 473
1pvd_A_4651pvd   A     MGMAGNESIUM ION G - 473
1pvd_A_4651pvd   A     TPPTHIAMINE DIPHOSPHATE Y - 474
1pvd_A_4651pvd   A     MGMAGNESIUM ION Y - 474
1pvd_A_4651pvd   A     TPPTHIAMINE DIPHOSPHATE T - 475
1pvd_A_4651pvd   A     MGMAGNESIUM ION T - 475
1pvd_A_4651pvd   A     TPPTHIAMINE DIPHOSPHATE I - 476
1pvd_A_4651pvd   A     TPPTHIAMINE DIPHOSPHATE E - 477
1zpd_A_4611zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER I - 465
1zpd_A_4611zpd   A     MGMAGNESIUM ION I - 465
1zpd_A_4611zpd   A     MGMAGNESIUM ION N - 466
1zpd_A_4611zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER N - 467
1zpd_A_4611zpd   A     MGMAGNESIUM ION N - 467
1zpd_A_4611zpd   A     MGMAGNESIUM ION Y - 468
1zpd_A_4611zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER G - 469
1zpd_A_4611zpd   A     MGMAGNESIUM ION G - 469
1zpd_A_4611zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER Y - 470
1zpd_A_4611zpd   A     MGMAGNESIUM ION Y - 470
1zpd_A_4611zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER T - 471
1zpd_A_4611zpd   A     MGMAGNESIUM ION T - 471
1zpd_A_4611zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER I - 472
1zpd_A_4611zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER E - 473
1zpd_A_4611zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER V - 474

Clusters included in this Subclass
CLUSTER: EH.3.236