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PDB code:

Information on SUBCLASS 5.56.1

Subclass Accession number: 7518 Subclass: 5.56.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 3 Average sequence ID (%) : 52.6 +/- 4.6 Average RMSD (Å) : 0.433 +/- 0.115 Consensus geometry d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a49_A_70	1a49	A	70	95	VARMNFSHGTHEYHAETIKNVRTATE	EEEEETTSS-HHHHHHHHHHHHHHHH	bbbbxaabebaaaaaaaaaaaaaaaa
1pkl_A_45	1pkl	A	47	72	VARMNFSHGSHEYHQTTINNVRQAAA	EEEEETTSS-HHHHHHHHHHHHHHHH	bbxbxaabexaaaaaaaaaaaaaaaa
1pky_C_30	1pky	C	30	55	VMRLNFSHGDYAEHGQRIQNLRNVMS	EEEEE-SS--HHHHHHHHHHHHHHHH	bxxbbaabebaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1a49_A_70	1a49	A	OXLOXALATE ION	R - 72
1a49_A_70	1a49	A	MGMAGNESIUM ION	R - 72
1a49_A_70	1a49	A	ATPADENOSINE-5'-TRIPHOSPHATE	R - 72
1a49_A_70	1a49	A	MGMAGNESIUM ION	N - 74
1a49_A_70	1a49	A	ATPADENOSINE-5'-TRIPHOSPHATE	N - 74
1a49_A_70	1a49	A	ATPADENOSINE-5'-TRIPHOSPHATE	S - 76
1a49_A_70	1a49	A	ATPADENOSINE-5'-TRIPHOSPHATE	H - 77
1a49_A_70	1a49	A	ATPADENOSINE-5'-TRIPHOSPHATE	G - 78
1a49_A_70	1a49	A	ATPADENOSINE-5'-TRIPHOSPHATE	Y - 82
1a49_A_70	1a49	A	ATPADENOSINE-5'-TRIPHOSPHATE	H - 83
1a49_A_70	1a49	A	ATPADENOSINE-5'-TRIPHOSPHATE	T - 86

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1pkl_A_45	1pkl	A	ADPADP SUBSTRATE BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES	R - 49
1pkl_A_45	1pkl	A	ADPADP SUBSTRATE BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES	N - 51
1pkl_A_45	1pkl	A	MONMONOVALENT CATION BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES	S - 53
1pkl_A_45	1pkl	A	ADPADP SUBSTRATE BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES	H - 54

Clusters included in this Subclass

CLUSTER: EH.4.262

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