Logo
Information on SUBCLASS 5.29.1
Subclass Accession number: 753
Subclass: 5.29.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 4.1 (>50 %)  4.1.1 (>50 %)  
GO : GO:0003723 (>50 %)  GO:0003735 (>50 %)  GO:0004497 (>50 %)  GO:0016829 (>50 %)  GO:0016830 (>50 %)  GO:0016831 (>50 %)  GO:0019843 (>50 %)  
SCOP : 50192 (>50 %)  50193 (>50 %)  50194 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 33.3 +/- 20.1
Average RMSD (Å) : 1.167 +/- 0.462

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: phXpppGXp
(φψ)-conformation: pbabaagba
Pattern: x[ILT][KT][CVY][AQ][DH][NS][ST][G][AT][NR][ER][ILV]x[V][IT][KST][V]
Conservation:-1.370-0.843-0.205-0.930-0.5990.3500.5910.1912.759-0.2170.1920.0610.124-1.1061.178-0.599-0.7551.178
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jj2_J_171jj2   J1734LITCADNTGARELKVISVEEEE-BSSSEEEEEEEEEbbxxabaagbabbbxabb
1m2o_A_4841m2o   A490507ITTYQHSSGTNRIRVTTVEEEEEETTTEEEEEEEEEbbxbxxaagbxbbxbbbb
1whi_*_71whi   -724RLKVADNSGAREVLVIKVEEEE-BSSSEEEEEEEEExbxbabaagxabbbxabx
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1whi_*_71whi   * R2A SECOND SITE IS PROPOSED TO INTERACT WITH 23S RRNA. IT IS LOCATED BETWEEN THE BETA BARREL AND THE C TERMINAL HELICAL DOMAIN.N - 13

Clusters included in this Subclass
CLUSTER: HA.4.170