ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.2.1

Subclass Accession number: 7634
Subclass: 9.2.1

Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 7

Average sequence ID (%) : 42.0 +/- 29.2
Average RMSD (Å) : 0.729 +/- 0.699

Consensus geometry

d (Å): 11

delta (°): 0-45

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	VcVLcppGSGphp
(φψ)-conformation:	bpabpaalbbbaa

Pattern:	[EQS]	[FIL]	[FLY]	[AEG]	[LV]	[DKR]	[V]	[LY]	[dgn]	[ADNS]	[DNST]	[G]	[ST]	[GP]	[qst]	[TVWY]	[AST]	x	[iv]	[AIV]	[anqs]	[GV]	[ilm]	[det]	[ewy]	[AKV]	[AGIT]	[adnst]
Conservation:	0.106	0.283	0.881	-0.428	0.792	0.171	1.723	0.344	-0.323	-0.401	-0.143	3.291	0.849	0.867	-0.941	-0.387	0.239	-1.429	-0.330	-0.049	-1.202	0.383	-0.477	-1.023	0.241	-0.515	-1.226	-1.296

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1cse_E_89	1cse	E	89	116	SLYAVKVLNSSGSGSYSGIVSGIEWATT	EEEEEE-S-TTS---HHHHHHHHHHHHH	xbbbbxabxaavbbbaaaaaaaaaaaaa
1ic6_A_89	1ic6	A	89	116	QLFGVKVLDDNGSGQYSTIIAGMDFVAS	EEEEEE-S-TTS---HHHHHHHHHHHHH	xbbxbxabxaavbbxaaaaaaaaaaaaa
1lw6_E_89	1lw6	E	89	116	SLYAVKVLGADGSGQYSWIINGIEWAIA	EEEEEE-S-TTS---HHHHHHHHHHHHH	xxbxbxabxaavbbxaaaaaaaaaaaaa
1mee_A_89	1mee	A	89	116	SLYAVKVLDSTGSGQYSWIINGIEWAIS	EEEEEE-S-TTS---HHHHHHHHHHHHH	xxbxbxabxaavbbbaaaaaaaaaaaaa
1mpt_*_89	1mpt	-	89	116	ELYAVKVLGASGSGSVSSIAQGLEWAGN	EEEEEE-S-TTS---HHHHHHHHHHHHH	xxbxbxabxaavbbbaaaaaaaaaaaaa
1nm8_A_189	1nm8	A	189	216	QFFELDVYHSDGTPLTADQIFVQLEKIW	EEEEEE-B-TTS-B--HHHHHHHHHHHH	xxbxbxabxaavxxxxaaaaaaaaaaaa
1thm_*_97	1thm	-	97	124	SILAVRVLDNSGSGTWTAVANGITYAAD	EEEEEE-S-TTS---HHHHHHHHHHHHH	bbbxbxabxaavbbbaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1thm_*_97	1thm	*	CACALCIUM ION	R - 102

Clusters included in this Subclass