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Information on SUBCLASS 10.6.1
Subclass Accession number: 7659
Subclass: 10.6.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 49.2 +/- 6.2
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XXhDhpTPpXFDNX
(φψ)-conformation: bpabaabaabpbaa
Pattern: [IL][STV][DNP][FL][D][LV][RST][T][P][DNT][AIK][F][D][N][AKN][Y][FY][AIV][N][L][EQR]
Conservation:-0.305-1.125-0.924-0.4261.040-0.515-1.0750.5871.493-0.823-1.5281.0401.0401.040-1.2261.4930.541-0.8741.0400.133-0.622
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gwu_A_2181gwu   A218238LVDFDLRTPTIFDNKYYVNLEEEES-SS-TT--STHHHHHHHbbxabaabaabxbaaaaaaaa
1pa2_A_2171pa2   A217237ITNLDLSTPDAFDNNYFANLQEEES-SSSSSS-STHHHHHHHbbxabaabaaxxbaaaaaaaa
1sch_A_2101sch   A210230LSPFDVTTPNKFDNAYYINLREEES-SSSTBS-STHHHHHHHxbxabaabaabxbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gwu_A_2181gwu   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 218
1gwu_A_2181gwu   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 221
1gwu_A_2181gwu   A     CACALCIUM ION F - 221
1gwu_A_2181gwu   A     CACALCIUM ION D - 222
1gwu_A_2181gwu   A     CACALCIUM ION R - 224
1gwu_A_2181gwu   A     CACALCIUM ION T - 225
1gwu_A_2181gwu   A     CACALCIUM ION P - 226
1gwu_A_2181gwu   A     CACALCIUM ION T - 227
1gwu_A_2181gwu   A     CACALCIUM ION I - 228
1gwu_A_2181gwu   A     CACALCIUM ION F - 229
1gwu_A_2181gwu   A     CACALCIUM ION D - 230
1gwu_A_2181gwu   A     CACALCIUM ION N - 231
1gwu_A_2181gwu   A     CACALCIUM ION K - 232
1gwu_A_2181gwu   A     CACALCIUM ION Y - 233
1pa2_A_2171pa2   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 217
1pa2_A_2171pa2   A     CACALCIUM ION L - 220
1pa2_A_2171pa2   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 220
1pa2_A_2171pa2   A     CACALCIUM ION D - 221
1pa2_A_2171pa2   A     CACALCIUM ION S - 223
1pa2_A_2171pa2   A     CACALCIUM ION T - 224
1pa2_A_2171pa2   A     CACALCIUM ION P - 225
1pa2_A_2171pa2   A     CACALCIUM ION D - 226
1pa2_A_2171pa2   A     CACALCIUM ION A - 227
1pa2_A_2171pa2   A     CACALCIUM ION F - 228
1pa2_A_2171pa2   A     CACALCIUM ION D - 229
1pa2_A_2171pa2   A     CACALCIUM ION Y - 232
1pa2_A_2171pa2   A     MGMAGNESIUM ION A - 234
1pa2_A_2171pa2   A     MGMAGNESIUM ION N - 235
1pa2_A_2171pa2   A     MGMAGNESIUM ION Q - 237
1sch_A_2101sch   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 210
1sch_A_2101sch   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 213
1sch_A_2101sch   A     CACALCIUM ION F - 213
1sch_A_2101sch   A     CACALCIUM ION D - 214
1sch_A_2101sch   A     CACALCIUM ION T - 216
1sch_A_2101sch   A     CACALCIUM ION T - 217
1sch_A_2101sch   A     CACALCIUM ION P - 218
1sch_A_2101sch   A     CACALCIUM ION N - 219
1sch_A_2101sch   A     CACALCIUM ION K - 220
1sch_A_2101sch   A     CACALCIUM ION N - 223
1sch_A_2101sch   A     CACALCIUM ION A - 224
1sch_A_2101sch   A     CACALCIUM ION Y - 225
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gwu_A_2181gwu   A CA2CA BINDING SITE FOR CHAIN AD - 222
1gwu_A_2181gwu   A CA2CA BINDING SITE FOR CHAIN AT - 225
1gwu_A_2181gwu   A CA2CA BINDING SITE FOR CHAIN AI - 228
1gwu_A_2181gwu   A CA2CA BINDING SITE FOR CHAIN AD - 230
1sch_A_2101sch   A APHPROXIMAL HEME POCKET.F - 213
1sch_A_2101sch   A APCPROXIMAL CATION SITE.D - 214
1sch_A_2101sch   A APCPROXIMAL CATION SITE.T - 217
1sch_A_2101sch   A APCPROXIMAL CATION SITE.K - 220

Clusters included in this Subclass
CLUSTER: EH.10.16