ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 29.1.1

Subclass Accession number: 7724
Subclass: 29.1.1

Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 57.2 +/- 17.2
Average RMSD (Å) : 0.425 +/- 0.050

Consensus geometry

d (Å): 17

delta (°): 135-180

theta (°): 0-45

rho (°): 180-225

Consensus Sequence:	pFXpXhhHPNVpXXGpICLDILpppWphXhphX
(φψ)-conformation:	bpappbbbaabpaagpbpbaaaaaapbaapbaa

Pattern:	[KTV]	[V]	[KR]	[F]	[IMTV]	[ST]	[KPR]	[CIM]	[FWY]	[H]	[P]	[N]	[IV]	[DY]	[AKQ]	x	[G]	[NRS]	[I]	[C]	[L]	[D]	[I]	[L]	[KQ]	[DEN]	[KNQR]	[W]	[ST]	[AP]	x	[LY]	[DQ]	[IV]	[AR]	[AT]	[IV]	[L]	[LT]	[S]	[IL]	[Q]	[AS]	[L]
Conservation:	-1.219	0.176	-0.051	1.086	-0.962	-0.351	-0.815	-0.837	0.152	1.996	1.541	1.086	-0.031	-0.842	-1.061	-1.521	1.086	-0.897	0.176	2.451	0.176	1.086	0.176	0.176	-0.265	-0.487	-0.820	3.361	-0.401	-0.368	-1.275	-0.378	-0.270	-0.039	-0.799	-0.575	-0.039	0.176	-0.857	0.176	-0.253	0.631	-0.469	0.176

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1j7d_B_68	1j7d	B	68	111	KVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQAL	EEEE-S---BTTB-TT-BB--GGGTTS--TTS-HHHHHHHHHHH	bbbxabxbxbaabxaavxbbbaaaaaaxbaaaeaaaaaaaaaaa
1q34_A_69	1q34	A	69	112	TVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSL	EEEESS----TTB-TTSBB--GGGTTT--TT--HHHHHHHHHHH	bbbxapxbbbaabxaavxxxbaaaFaaxbaaxbaaaaaaaaaaa
2aak_*_69	2aak	-	69	112	TVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSL	EEEESS----TTB-TTSBB--GGGTTS--TT--HHHHHHHHHHH	xbbxaxxbbbaabxaagxbxbaaaaaaxbaapbaaaaaaaaaaa
2e2c_*_95	2e2c	-	95	138	VVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSL	EEEESS---BTTB-TT-BB--GGGTTT--TT--HHHHHHHHHHH	xbbxaxpbxbaabxaavxbbbaaaFaaxbaaxbaaaaaaaaaaa

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
2aak_*_69	2aak	*	C88CYS 88 BINDS A UBIQUITIN MOLECULE THROUGH A THIOLESTER BOND WITH THE C TERMINUS OF UBIQUITIN.	C - 88

Clusters included in this Subclass