Information on SUBCLASS 3.21.1 |
Subclass Accession number: 7865
Subclass: 3.21.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 15.4 Average RMSD (Å) : 0.533 +/- 0.115 Consensus geometry
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Consensus Sequence: | XhpcXpX |
(φψ)-conformation: | bbllNbb |
Pattern: | x | [FL] | [EN] | [GN] | x | [DER] | x | [IV] |
Conservation: | -1.042 | 0.748 | 0.781 | 0.915 | -1.200 | -0.169 | -1.121 | 1.088 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8d_*_354 | 1a8d | - | 354 | 361 | AFNNLDRI | EETTTEEE | bxllNbxx |
1igr_A_239 | 1igr | A | 240 | 247 | RFEGWRCV | EETTTEEE | xbvvNbbb |
1thg_*_4 | 1thg | - | 6 | 13 | VLNGNEVI | EETTTEEE | bblgNbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1thg_*_4 | 1thg | * | NAGN-ACETYL-D-GLUCOSAMINE | T - 4 |
1thg_*_4 | 1thg | * | NAGN-ACETYL-D-GLUCOSAMINE | A - 5 |
1thg_*_4 | 1thg | * | NAGN-ACETYL-D-GLUCOSAMINE | V - 6 |
1thg_*_4 | 1thg | * | NAGN-ACETYL-D-GLUCOSAMINE | V - 12 |
1thg_*_4 | 1thg | * | NAGN-ACETYL-D-GLUCOSAMINE | I - 13 |
Clusters included in this Subclass |
CLUSTER: HA.2.100 |