Information on SUBCLASS 5.1.8 |
Subclass Accession number: 7926
Subclass: 5.1.8 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 3.5 +/- 5.0 Average RMSD (Å) : 1.300 +/- 0.173 Consensus geometry
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Consensus Sequence: | hXXXXXXXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | [GQT] | [LTV] | x | [AIL] | [CRT] | [GLT] | [PQR] | x | [GQ] | [EMR] | x | x | [CWY] | [ACG] | [GL] | [EGT] | x | [AIL] | x |
Conservation: | -0.560 | 0.605 | -0.893 | 0.438 | -0.061 | -1.392 | 0.605 | -0.727 | 1.933 | -0.061 | -0.727 | -1.226 | 2.269 | 0.605 | 0.435 | -0.560 | -1.226 | 0.438 | 0.105 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bu6_O_287 | 1bu6 | O | 288 | 306 | TTIACGPTGEVNYALEGAV | EEEEE-TTS-EEEEEEEEE | bbbbbxaavxpbbbbbbbb |
1ddj_A_576 | 1ddj | A | 576 | 594 | QVSLRTRFGMHFCGGTLIS | EEEEE-TTS-EEEEEEEEE | pbbxbxaagbxNbbbbxab |
2hlc_A_30 | 2hlc | A | 32 | 50 | GLDITLQDQRRVWCGGSLI | EEEEEETTS-EEEEEEEEE | bbbbbxaavxbbbbxbbxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bu6_O_287 | 1bu6 | O | GOLGLYCEROL | E - 303 |
Clusters included in this Subclass |
CLUSTER: HA.5.104 |