Logo
Information on SUBCLASS 5.1.8
Subclass Accession number: 7926
Subclass: 5.1.8 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 3.5 +/- 5.0
Average RMSD (Å) : 1.300 +/- 0.173

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: hXXXXXXXX
(φψ)-conformation: bbpaagpbb
Pattern: [GQT][LTV]x[AIL][CRT][GLT][PQR]x[GQ][EMR]xx[CWY][ACG][GL][EGT]x[AIL]x
Conservation:-0.5600.605-0.8930.438-0.061-1.3920.605-0.7271.933-0.061-0.727-1.2262.2690.6050.435-0.560-1.2260.4380.105
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bu6_O_2871bu6   O288306TTIACGPTGEVNYALEGAVEEEEE-TTS-EEEEEEEEEbbbbbxaavxpbbbbbbbb
1ddj_A_5761ddj   A576594QVSLRTRFGMHFCGGTLISEEEEE-TTS-EEEEEEEEEpbbxbxaagbxNbbbbxab
2hlc_A_302hlc   A3250GLDITLQDQRRVWCGGSLIEEEEEETTS-EEEEEEEEEbbbbbxaavxbbbbxbbxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bu6_O_2871bu6   O     GOLGLYCEROL E - 303

Clusters included in this Subclass
CLUSTER: HA.5.104