Logo
Information on SUBCLASS 5.15.1
Subclass Accession number: 7953
Subclass: 5.15.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 27.8 +/- 24.4
Average RMSD (Å) : 0.325 +/- 0.126

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hpGXphppX
(φψ)-conformation: bbeaalabb
Pattern: [FMY][RSTY][G][EPS][DNS][CL][NST]xx
Conservation:0.188-1.1272.087-0.4720.0020.965-0.145-0.895-0.603
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cvu_A_641cvu   A6472FYGENCTTPEETTTT-EEbbeaalaxx
1eqg_A_641eqg   A6472YSGPNCTIPEETTTT-EEbbeaalaxx
1k32_A_921k32   A98106MRGSSLNTAEESTT--EEbbMaalabb
1lk9_A_451lk9   A4553YTGPDCSEKEESTTS-EEbbeaalaxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cvu_A_641cvu   A     NAGN-ACETYL-D-GLUCOSAMINE E - 67
1cvu_A_641cvu   A     NAGN-ACETYL-D-GLUCOSAMINE N - 68
1cvu_A_641cvu   A     NAGN-ACETYL-D-GLUCOSAMINE T - 70
1eqg_A_641eqg   A     NAGN-ACETYL-D-GLUCOSAMINE P - 67
1eqg_A_641eqg   A     BOGB-OCTYLGLUCOSIDE T - 70
1eqg_A_641eqg   A     BOGB-OCTYLGLUCOSIDE I - 71
1eqg_A_641eqg   A     BOGB-OCTYLGLUCOSIDE P - 72

Clusters included in this Subclass
CLUSTER: HA.4.88