Information on SUBCLASS 5.15.1 |
Subclass Accession number: 7953
Subclass: 5.15.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 27.8 +/- 24.4 Average RMSD (Å) : 0.325 +/- 0.126 Consensus geometry
|
Consensus Sequence: | hpGXphppX |
(φψ)-conformation: | bbeaalabb |
Pattern: | [FMY] | [RSTY] | [G] | [EPS] | [DNS] | [CL] | [NST] | x | x |
Conservation: | 0.188 | -1.127 | 2.087 | -0.472 | 0.002 | 0.965 | -0.145 | -0.895 | -0.603 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cvu_A_64 | 1cvu | A | 64 | 72 | FYGENCTTP | EETTTT-EE | bbeaalaxx |
1eqg_A_64 | 1eqg | A | 64 | 72 | YSGPNCTIP | EETTTT-EE | bbeaalaxx |
1k32_A_92 | 1k32 | A | 98 | 106 | MRGSSLNTA | EESTT--EE | bbMaalabb |
1lk9_A_45 | 1lk9 | A | 45 | 53 | YTGPDCSEK | EESTTS-EE | bbeaalaxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cvu_A_64 | 1cvu | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 67 |
1cvu_A_64 | 1cvu | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 68 |
1cvu_A_64 | 1cvu | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 70 |
1eqg_A_64 | 1eqg | A | NAGN-ACETYL-D-GLUCOSAMINE | P - 67 |
1eqg_A_64 | 1eqg | A | BOGB-OCTYLGLUCOSIDE | T - 70 |
1eqg_A_64 | 1eqg | A | BOGB-OCTYLGLUCOSIDE | I - 71 |
1eqg_A_64 | 1eqg | A | BOGB-OCTYLGLUCOSIDE | P - 72 |
Clusters included in this Subclass |
CLUSTER: HA.4.88 |