Information on SUBCLASS 5.18.1 |
Subclass Accession number: 7956
Subclass: 5.18.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 21.4 +/- 35.1 Average RMSD (Å) : 1.133 +/- 0.493 Consensus geometry
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Consensus Sequence: | XpXhXppXh |
(φψ)-conformation: | bbppwlpbb |
Pattern: | [EKM] | [LM] | [DY] | [CIV] | [HW] | [DST] | [AGS] | [FP] | [NP] | [NQ] | [EN] | [PT] | [FIY] | [AI] |
Conservation: | -1.387 | 1.480 | -0.419 | -0.194 | 1.879 | -0.791 | -0.641 | -1.283 | 0.236 | 0.858 | 0.858 | 0.233 | 0.104 | -0.932 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1djx_A_339 | 1djx | A | 341 | 354 | ELDCWDGPNQEPII | EEEEE--GGG--EE | bbxxbxbplvbpbb |
1g72_A_64 | 1g72 | A | 64 | 77 | MMYVHSAFPNNTYA | EEEEE-STTT-EEE | bbbbbbxpwlxbbb |
1h4i_A_64 | 1h4i | A | 64 | 77 | KMYIHTSFPNNTFA | EEEEE-STTT-EEE | bbbbbbxpwlxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1djx_A_339 | 1djx | A | I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE | E - 341 |
1djx_A_339 | 1djx | A | CACALCIUM ION | E - 341 |
1djx_A_339 | 1djx | A | CACALCIUM ION | L - 342 |
1djx_A_339 | 1djx | A | I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE | D - 343 |
1djx_A_339 | 1djx | A | CACALCIUM ION | D - 343 |
Clusters included in this Subclass |
CLUSTER: HA.7.48 |