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Information on SUBCLASS 5.29.1
Subclass Accession number: 7967
Subclass: 5.29.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 11.9 +/- 12.0
Average RMSD (Å) : 1.133 +/- 0.321

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXphGXphX
(φψ)-conformation: bbppeapbb
Pattern: [AV][FRY][QT]x[DEY][ALP][G]x[KNT][ALP]x[LVY]x[ILY]
Conservation:0.4600.0150.527-0.839-0.140-0.6843.119-0.5280.015-0.684-0.606-0.063-0.6840.092
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxn_I_1101bxn   I112125VRQEEPGRTLRYSIEEEE-STT-EEEEExbxxxxeaxbbxbx
1fi4_A_2971fi4   A298311AYTFDAGPNAVLYYEEEE-SSS-EEEEEbbbbxxeaxbbbxb
1nr6_A_641nr6   A6477VFTVYLGMKPTVVLEEEEEBSSSEEEEEbbbbbxeaxxbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fi4_A_2971fi4   A     MSESELENOMETHIONINE V - 297
1fi4_A_2971fi4   A     MSESELENOMETHIONINE A - 298
1fi4_A_2971fi4   A     MSESELENOMETHIONINE Y - 299
1fi4_A_2971fi4   A     MSESELENOMETHIONINE T - 300
1fi4_A_2971fi4   A     MSESELENOMETHIONINE F - 301
1fi4_A_2971fi4   A     MSESELENOMETHIONINE D - 302
1fi4_A_2971fi4   A     MSESELENOMETHIONINE G - 304
1fi4_A_2971fi4   A     MSESELENOMETHIONINE P - 305
1fi4_A_2971fi4   A     MSESELENOMETHIONINE Y - 310
1fi4_A_2971fi4   A     MSESELENOMETHIONINE Y - 311

Clusters included in this Subclass
CLUSTER: HA.4.103