Information on SUBCLASS 8.1.1 |
Subclass Accession number: 8008
Subclass: 8.1.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 17.4 +/- 20.3 Average RMSD (Å) : 0.917 +/- 0.598 Consensus geometry
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Consensus Sequence: | XhXXpcXXpXXX |
(φψ)-conformation: | bbpbpgbappbb |
Pattern: | x | [FITV] | [adsv] | [HL] | [EGRS] | [gy] | [ftvy] | x | [DEKQT] | [KPS] | [fkv] | x | [ILMV] |
Conservation: | -1.218 | 0.608 | -0.878 | 0.453 | -0.097 | 0.955 | -0.688 | -1.104 | 0.416 | 1.631 | -0.820 | -0.808 | 1.549 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1djx_A_353 | 1djx | A | 353 | 365 | IIYHGYTFTSKIL | EE--TTS----EE | bbbxpvbaxpbbx |
1fx2_A_1083 | 1fx2 | A | 1088 | 1100 | DVALRGVSDPVKM | EE--TT-SS-EEE | bbxbxgxabxbxb |
1fx4_A_1071 | 1fx4 | A | 1076 | 1088 | ATVLRGVPEPVRM | EE--TT-SS-EEE | xbxbxvbabxbxb |
1lok_A_63 | 1lok | A | 67 | 79 | QVSHSGYNQKSVV | EE--TTSS--EEE | bxxbxgbaxbxbb |
1mx1_A_1036 | 1mx1 | A | 1037 | 1049 | FVSLEGFAQPVAI | EE--TT-SS-EEE | xbxbpgbaxxxxb |
3pmg_A_170 | 3pmg | A | 173 | 185 | QFDLENKFKPFTV | EE--TT-SS-EEE | bbxxplbaxxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1djx_A_353 | 1djx | A | I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE | H - 356 |
1djx_A_353 | 1djx | A | CACALCIUM ION | H - 356 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | F - 1050 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | L - 1051 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | G - 1052 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | I - 1053 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | P - 1054 |
Clusters included in this Subclass |
CLUSTER: HA.7.16 |
CLUSTER: HA.8.7 |