Information on SUBCLASS 12.5.1 |
Subclass Accession number: 8045
Subclass: 12.5.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 68.9 +/- 14.7 Average RMSD (Å) : 0.220 +/- 0.045 Consensus geometry
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Consensus Sequence: | SYXDhLXGhLcGNXhp |
(φψ)-conformation: | bbppaallaalpbpbb |
Pattern: | [G] | [ST] | [Y] | [ANT] | [D] | [VY] | [L] | [GS] | [G] | [ILV] | [L] | [GN] | [G] | [N] | [GNST] | [IL] | [ST] | [SV] |
Conservation: | 1.162 | -0.540 | 1.683 | -1.279 | 1.162 | -0.884 | 0.118 | -0.501 | 1.162 | -0.606 | 0.118 | -0.337 | 1.162 | 1.162 | -1.291 | -0.388 | -0.549 | -1.355 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cgt_*_454 | 1cgt | - | 454 | 471 | GSYTDVLGGVLNGNNITS | EEE--TTTTTTS---EEE | ebbxxaalvaalxbxbbb |
1ciu_*_454 | 1ciu | - | 454 | 471 | GTYTDVLGGLLNGNSISV | EEE--TTTTTTB---EEE | ebbxxaavvaavxbxbbb |
1d3c_A_454 | 1d3c | A | 454 | 471 | GSYNDVLGGLLNGNTLSV | EEE--TTTTTTS---EEE | ebbxxaalvaalxbxbbb |
1pam_A_454 | 1pam | A | 454 | 471 | GSYNDVLGGILNGNTLTV | EEE--TTTTTTS---EEE | ebxxxaalvaavxbxbxb |
1qho_A_455 | 1qho | A | 455 | 472 | GSYADYLSGLLGGNGISV | EEE--TTTTTTS---EEE | ebbxxaalvaavxbxbbb |
Clusters included in this Subclass |
CLUSTER: HA.11.8 |