Information on SUBCLASS 20.2.1 |
Subclass Accession number: 8060
Subclass: 20.2.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: Conserved Annotation EC : 5.2 (>75 %) 5.2.1 (>75 %) 5.2.1.8 GO : GO:0003755 (>50 %) GO:0016853 (>50 %) GO:0016859 (>50 %) SCOP : 54533 (>75 %) 54534 (>75 %) 54535 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 70.4 +/- -24.1 Average RMSD (Å) : 0.233 +/- 0.058 Consensus geometry
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Consensus Sequence: | ThXhXhAYGhpGXPGhIPPNXTLh |
(φψ)-conformation: | bbpaaaFaeaaebplabpplppbb |
Pattern: | [KR] | [A] | [KR] | [L] | [T] | [CI] | [PST] | [GP] | [DP] | [VY] | [A] | [Y] | [G] | [AP] | [RT] | [G] | [FH] | [P] | [G] | [ILV] | [I] | [P] | [P] | [N] | [AS] | [T] | [L] | [IV] | [F] | [D] | [V] | [E] | [L] | [L] | [KN] | [LV] |
Conservation: | -0.417 | -0.115 | -0.417 | -0.115 | 0.497 | -1.056 | -1.612 | -1.155 | -0.891 | -1.009 | -0.115 | 1.721 | 1.109 | -1.239 | -1.332 | 1.109 | -0.676 | 1.721 | 1.109 | -0.932 | -0.115 | 1.721 | 1.721 | 1.109 | -1.030 | 0.497 | -0.115 | -0.420 | 1.109 | 1.109 | -0.115 | 0.497 | -0.115 | -0.115 | -0.889 | -1.030 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c9h_A_71 | 1c9h | A | 71 | 106 | RAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNL | EEEEEE-GGGTTTTT-BTTTB-TT--EEEEEEEEEE | bbxbbbxaaaFaeaaebpvabxplxxbbbxbbxabb |
1fkl_*_71 | 1fkl | - | 71 | 106 | RAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKL | EEEEEE-GGGTTTTT-BTTTB-TT--EEEEEEEEEE | bbxbbbxaaaFaeaaebpvabxplxxbbbbbbxabb |
1yat_*_71 | 1yat | - | 71 | 106 | KARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV | EEEEEE-GGGTTTTT-BTTTB-TT--EEEEEEEEEE | bbbbxbxaaaFaeaaebpvabxplxxbbbxbbxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c9h_A_71 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | Y - 82 |
1c9h_A_71 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | H - 87 |
1c9h_A_71 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | V - 90 |
1c9h_A_71 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | I - 91 |
1c9h_A_71 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | L - 97 |
1c9h_A_71 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | F - 99 |
1fkl_*_71 | 1fkl | * | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | I - 90 |
1yat_*_71 | 1yat | * | FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN | A - 81 |
1yat_*_71 | 1yat | * | FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN | Y - 82 |
1yat_*_71 | 1yat | * | FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN | G - 83 |
1yat_*_71 | 1yat | * | FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN | F - 87 |
1yat_*_71 | 1yat | * | FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN | L - 90 |
1yat_*_71 | 1yat | * | FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN | I - 91 |
1yat_*_71 | 1yat | * | FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN | L - 97 |
1yat_*_71 | 1yat | * | FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN | F - 99 |
Clusters included in this Subclass |
CLUSTER: HA.19.2 |