Logo
Information on SUBCLASS 2.3.12
Subclass Accession number: 8236
Subclass: 2.3.12 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.0 +/- 15.2
Average RMSD (Å) : 0.633 +/- 0.289

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXGXXX
(φψ)-conformation: aalabp
Pattern: x[APV]xx[RS][ALM][AL][DER][FMQ][AL][KQR][AKT][EW][G]xxx[FV]xx
Conservation:-0.505-0.414-0.5050.1130.295-0.0530.1530.217-0.3240.1530.849-0.3240.4823.647-0.956-0.865-0.9560.363-0.595-0.775
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ed8_A_3351ed8   A347366EAVQRALEFAKKEGNTLVIVHHHHHHHHHHHHHSSEEEEEaaaaaaaaaaaaavabxbbb
1kt8_A_2691kt8   A269288VVRQSLLDMAQTWGEFRVVEHHHHHHHHHHHHH-SSEEEEaaaaaaaaaaaaavabxbbb
2pia_*_1232pia   -124143TPMLSMARQLRAEGLRSFRLHHHHHHHHHHHHH-SSEEEEaaaaaaaaaaaaavabxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kt8_A_2691kt8   A     ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE V - 269
1kt8_A_2691kt8   A     ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE V - 270
1kt8_A_2691kt8   A     ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE R - 271
2pia_*_1232pia   *     FMNFLAVIN MONONUCLEOTIDE T - 124
2pia_*_1232pia   *     FMNFLAVIN MONONUCLEOTIDE P - 125

Clusters included in this Subclass
CLUSTER: HE.3.188