Information on SUBCLASS 2.3.12 |
Subclass Accession number: 8236
Subclass: 2.3.12 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.0 +/- 15.2 Average RMSD (Å) : 0.633 +/- 0.289 Consensus geometry
|
Consensus Sequence: | XXGXXX |
(φψ)-conformation: | aalabp |
Pattern: | x | [APV] | x | x | [RS] | [ALM] | [AL] | [DER] | [FMQ] | [AL] | [KQR] | [AKT] | [EW] | [G] | x | x | x | [FV] | x | x |
Conservation: | -0.505 | -0.414 | -0.505 | 0.113 | 0.295 | -0.053 | 0.153 | 0.217 | -0.324 | 0.153 | 0.849 | -0.324 | 0.482 | 3.647 | -0.956 | -0.865 | -0.956 | 0.363 | -0.595 | -0.775 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ed8_A_335 | 1ed8 | A | 347 | 366 | EAVQRALEFAKKEGNTLVIV | HHHHHHHHHHHHHSSEEEEE | aaaaaaaaaaaaavabxbbb |
1kt8_A_269 | 1kt8 | A | 269 | 288 | VVRQSLLDMAQTWGEFRVVE | HHHHHHHHHHHHH-SSEEEE | aaaaaaaaaaaaavabxbbb |
2pia_*_123 | 2pia | - | 124 | 143 | TPMLSMARQLRAEGLRSFRL | HHHHHHHHHHHHH-SSEEEE | aaaaaaaaaaaaavabxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kt8_A_269 | 1kt8 | A | ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE | V - 269 |
1kt8_A_269 | 1kt8 | A | ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE | V - 270 |
1kt8_A_269 | 1kt8 | A | ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE | R - 271 |
2pia_*_123 | 2pia | * | FMNFLAVIN MONONUCLEOTIDE | T - 124 |
2pia_*_123 | 2pia | * | FMNFLAVIN MONONUCLEOTIDE | P - 125 |
Clusters included in this Subclass |
CLUSTER: HE.3.188 |