Logo
Information on SUBCLASS 3.15.4
Subclass Accession number: 8376
Subclass: 3.15.4 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 16.7 +/- 0.0
Average RMSD (Å) : 0.500 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: EhcDphX
(φψ)-conformation: aaeaabp
Pattern: [TV][E][EQ][DK][KL][EK][HI][FV]x[IT][AI][K][DR][E][AL][GK][D][QS][AI][AS][LV]x[AV][DQ]
Conservation:-0.1761.7610.704-0.176-0.8800.352-0.704-0.352-1.232-0.528-0.7041.761-0.5281.761-0.704-0.5282.465-0.176-0.7040.0000.000-1.232-0.3520.176
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f6k_A_561f6k   A5679TEEKKEIFRIAKDEAKDQIALIAQHHHHHHHHHHHHHHHTTSSEEEEEaaaaaaaaaaaaaaaeaabxbbbx
1muc_A_1751muc   A175198VEQDLKHVVTIKRELGDSASVRVDHHHHHHHHHHHHHHHGGGSEEEEEaaaaaaaaaaaaaaaeaabxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f6k_A_561f6k   A     GOLGLYCEROL K - 67
1f6k_A_561f6k   A     GOLGLYCEROL K - 71
1f6k_A_561f6k   A     GOLGLYCEROL D - 72
1f6k_A_561f6k   A     GOLGLYCEROL Q - 73
1f6k_A_561f6k   A     GOLGLYCEROL I - 74
1f6k_A_561f6k   A     GOLGLYCEROL A - 75
1muc_A_1751muc   A     MNMANGANESE (II) ION D - 198
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1muc_A_1751muc   A MNARESIDUES INVOLVED IN THE COORDINATION OF MN-ION IN CHAIN A.D - 198

Clusters included in this Subclass
CLUSTER: HE.3.231