Information on SUBCLASS 6.16.1 |
Subclass Accession number: 8660
Subclass: 6.16.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 61.5 +/- 20.1 Average RMSD (Å) : 0.200 +/- 0.071 Consensus geometry
|
Consensus Sequence: | ESpXcTpXXN |
(φψ)-conformation: | aallpaapbb |
Pattern: | [LM] | [agr] | [N] | [W] | [V] | [C] | [ALM] | [ASV] | [EK] | [FHWY] | [E] | [S] | [NS] | [FRY] | [DN] | [T] | [QRS] | [AK] | [FT] | [N] |
Conservation: | -0.220 | -1.281 | 0.833 | 2.713 | 0.080 | 1.961 | -0.838 | -0.961 | -0.287 | -0.428 | 0.456 | 0.080 | -0.314 | -0.796 | -0.054 | 0.456 | -0.761 | -0.752 | -0.720 | 0.833 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gd6_A_22 | 1gd6 | A | 22 | 41 | MRNWVCLVEHESSRDTSKTN | HHHHHHHHHHHTTTBTT-EE | aaaaaaaaaaaavlbaaxbb |
1lmq_*_25 | 1lmq | - | 25 | 44 | LPNWVCLSKWESSYNTQATN | HHHHHHHHHHHHTTBTT-EE | aaaaaaaaaaaalvxaaxbb |
1qqy_A_25 | 1qqy | A | 25 | 44 | LANWVCMAEYESNFNTQAFN | HHHHHHHHHHHHTTBTT-EE | aaaaaaaaaaaalvxaaxbb |
2eql_*_25 | 2eql | - | 25 | 44 | LANWVCMAEYESNFNTRAFN | HHHHHHHHHHHHSSBTT-EE | aaaaaaaaaaaavvbaaxbb |
3lzt_*_25 | 3lzt | - | 25 | 44 | LGNWVCAAKFESNFNTQATN | HHHHHHHHHHHHTTBTT-EE | aaaaaaaaaaaalvxaapbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lmq_*_25 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | E - 35 |
1lmq_*_25 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | N - 44 |
3lzt_*_25 | 3lzt | * | ACTACETATE ION | E - 35 |
Clusters included in this Subclass |
CLUSTER: HE.6.71 |