Logo
Information on SUBCLASS 6.23.1
Subclass Accession number: 8667
Subclass: 6.23.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 25.0 +/- 18.7
Average RMSD (Å) : 0.475 +/- 0.206

Consensus geometry
d (Å): 13 delta (°): 135-180 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXphpXGcXh
(φψ)-conformation: aapaabeebb
Pattern: [KV][E][DE][ATV][ILV][DKY][FL][AGIV][KRS][DHR][AS][FIL]x[AQS][AG][AIT][EHKW][NRW][DH][AGIL]x[SV][G][DGS][GNSV][ILV][DENR][ILMV][CLVY][HIV][LMV][ET]
Conservation:-0.4952.3361.476-0.3010.703-0.7900.454-1.0660.132-0.3070.6540.129-1.066-0.3010.469-0.673-0.830-0.7011.024-1.350-1.161-0.3053.092-0.106-1.1610.612-0.3100.304-0.783-0.4550.2900.484
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ryp_1_1681ryp   1168199VEEVIKLVRDSFTSATERHIQVGDGLEILIVTHHHHHHHHHHHHHHHHHH-TT--SEEEEEEEEaaaaaaaaaaaaaaaaaabaabeGbbbbbbbb
1ryp_H_1481ryp   H148179KEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTHHHHHHHHHHHHHHHHHH-TT--S-EEEEEEEaaaaaaaaaaaaaaaaaaxaabeebbbbbxbb
1ryp_I_1481ryp   I148179KEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEHHHHHHHHHHHHHHHHHH-TT--S-EEEEEEEaaaaaaaaaaaaaaaaaabaabeebbbbbbbb
1ryp_L_1501ryp   L150181VEDALYLGKRSILAAAHRDAYSGGSVNLYHVTHHHHHHHHHHHHHHHHHH-TT--SEEEEEEEEaaaaaaaaaaaaaaaaaaxaabeGbbbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ryp_H_1481ryp   H     MGMAGNESIUM ION A - 162
1ryp_I_1481ryp   I     MGMAGNESIUM ION G - 162
1ryp_H_1481ryp   H     MGMAGNESIUM ION I - 163
1ryp_H_1481ryp   H     MGMAGNESIUM ION K - 164
1ryp_I_1481ryp   I     MGMAGNESIUM ION W - 164
1ryp_L_1501ryp   L     MGMAGNESIUM ION A - 164
1ryp_H_1481ryp   H     MGMAGNESIUM ION W - 165
1ryp_I_1481ryp   I     MGMAGNESIUM ION N - 165
1ryp_L_1501ryp   L     MGMAGNESIUM ION A - 165
1ryp_H_1481ryp   H     MGMAGNESIUM ION D - 166
1ryp_L_1501ryp   L     MGMAGNESIUM ION H - 166
1ryp_H_1481ryp   H     MGMAGNESIUM ION G - 167
1ryp_I_1481ryp   I     MGMAGNESIUM ION L - 167
1ryp_L_1501ryp   L     MGMAGNESIUM ION R - 167
1ryp_H_1481ryp   H     MGMAGNESIUM ION S - 168
1ryp_I_1481ryp   I     MGMAGNESIUM ION G - 168
1ryp_L_1501ryp   L     MGMAGNESIUM ION D - 168
1ryp_H_1481ryp   H     MGMAGNESIUM ION S - 169
1ryp_L_1501ryp   L     MGMAGNESIUM ION A - 169
1ryp_H_1481ryp   H     MGMAGNESIUM ION G - 170
1ryp_L_1501ryp   L     MGMAGNESIUM ION Y - 170
1ryp_L_1501ryp   L     MGMAGNESIUM ION S - 171
1ryp_L_1501ryp   L     MGMAGNESIUM ION G - 172
1ryp_1_1681ryp   1     MGMAGNESIUM ION A - 182
1ryp_1_1681ryp   1     MGMAGNESIUM ION T - 183
1ryp_1_1681ryp   1     MGMAGNESIUM ION E - 184
1ryp_1_1681ryp   1     MGMAGNESIUM ION R - 185
1ryp_1_1681ryp   1     MGMAGNESIUM ION H - 186
1ryp_1_1681ryp   1     MGMAGNESIUM ION I - 187
1ryp_1_1681ryp   1     MGMAGNESIUM ION Q - 188
1ryp_1_1681ryp   1     MGMAGNESIUM ION V - 189
1ryp_1_1681ryp   1     MGMAGNESIUM ION G - 190

Clusters included in this Subclass
CLUSTER: HE.6.137