ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.24.1

Subclass Accession number: 8668
Subclass: 6.24.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 28.2 +/- 23.7
Average RMSD (Å) : 0.475 +/- 0.096

Consensus geometry

d (Å): 7

delta (°): 45-90

theta (°): 90-135

rho (°): 180-225

Consensus Sequence:	hXppEhhXVX
(φψ)-conformation:	aapaaalabb

Pattern:	[D]	[FR]	[HIV]	[AV]	[EF]	[FIY]	[AL]	x	[FTVW]	x	[AGST]	[IL]	[CILV]	[AMT]	[AGIT]	x	[ILV]	[EGS]	[KR]	[IM]	[A]	x	[DE]	[ILW]	x	[HIL]	[LMY]	x	[QRT]	[KST]	[E]	[FIV]	x	[EF]	[LV]	x
Conservation:	3.026	-0.478	-0.514	0.077	-0.195	0.463	-0.023	-0.124	-0.844	-0.938	-0.522	0.824	-0.153	-0.555	-1.259	0.191	0.531	-0.450	1.183	0.935	1.552	-0.937	1.672	-0.323	-1.344	-0.610	-0.050	-0.891	-0.364	-0.121	2.289	0.067	-1.121	-0.478	0.650	-1.167

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c3c_A_217	1c3c	A	217	252	DRHAFYLSTLAIVAAGIERIAVEIRHLQRTEVLEVE	HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT-SEE	aaaaaaaaaaaaaaaaaaaaaaaaaaaaxaaalabb
1k62_A_237	1k62	A	237	272	DFVAEFLFWRSLCMTHLSRMAEDLILYCTKEFSFVQ	HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTT--EE	aaaaaaaaaaaaaaaaaaaaaaaaaaaaxaaalabb
1k7w_A_239	1k7w	A	239	274	DFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGFLT	HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT--EE	aaaaaaaaaaaaaaaaaaaaaaaaaaaaxaaavabb
1q5n_A_232	1q5n	A	232	267	DRIVEIASVLGIITGNVGKMARDWSLMMQTEIAEVF	HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT--EE	aaaaaaaaaaaaaaaaaaaaaaaaaaaapaaalabb

Clusters included in this Subclass