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Information on SUBCLASS 7.8.1
Subclass Accession number: 8694
Subclass: 7.8.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 48.0 +/- 30.6
Average RMSD (Å) : 0.240 +/- 0.055

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pXGphXpXXhh
(φψ)-conformation: aalpbppbwbb
Pattern: [AMP][DY][aik][L][FLV][ER]x[G][KQR][FY][AK][HKNS][ITV][PQ][IVY][IL][iv][G][DNV][NQ]
Conservation:-0.943-0.149-1.3820.901-0.5550.120-1.2582.0840.0651.498-0.392-0.626-0.2450.321-0.3300.352-0.7492.084-0.9930.199
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gz7_A_3191gz7   A319338MYALVRDGKYAHVPVIIGDQHHHHHHTT-S----EEEEEEaaaaaaavxbxxbwbbbbbx
1llf_A_3191llf   A319338MYKLVRDGKYASVPVIIGDQHHHHHHTT-S----EEEEEEaaaaaaavxbxxbwbbbbbx
1lpp_*_3191lpp   -319338MYALVREGKYANIPVIIGDQHHHHHHTT-S----EEEEEEaaaaaaavxbxxbwbbbbbx
1p0i_A_3031p0i   A303322PDILLELGQFKKTQILVGVNHHHHHHTT-S--S-EEEEEEaaaaaaavxbxxbxbbbbbb
1thg_*_3321thg   -332351AYELFRSGRYAKVPYISGNQHHHHHHTT-S----EEEEEEaaaaaaavxbxxbwbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gz7_A_3191gz7   A     GOLGLYCEROL Y - 328
1gz7_A_3191gz7   A     GOLGLYCEROL A - 329
1gz7_A_3191gz7   A     GOLGLYCEROL H - 330
1gz7_A_3191gz7   A     GOLGLYCEROL V - 331
1lpp_*_3191lpp   *     CACALCIUM ION E - 325
1lpp_*_3191lpp   *     CACALCIUM ION G - 326
1lpp_*_3191lpp   *     CACALCIUM ION K - 327
1lpp_*_3191lpp   *     CACALCIUM ION Y - 328
1lpp_*_3191lpp   *     CACALCIUM ION N - 330
1p0i_A_3031p0i   A     SULSULFATE ANION T - 315
1p0i_A_3031p0i   A     SULSULFATE ANION Q - 316
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gz7_A_3191gz7   A AC9GOL BINDING SITE FOR CHAIN AA - 329
1gz7_A_3191gz7   A AC9GOL BINDING SITE FOR CHAIN AH - 330

Clusters included in this Subclass
CLUSTER: HE.8.18