Information on SUBCLASS 10.7.1 |
Subclass Accession number: 8750
Subclass: 10.7.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.3 (>75 %) 1.3.99 (>75 %) 1.3.99.1 GO : GO:0000104 (>75 %) GO:0015036 (>50 %) GO:0016627 (>75 %) SCOP : 56424 (>75 %) 56425 (>75 %) 56426 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 37.9 +/- 14.6 Average RMSD (Å) : 0.500 +/- 0.100 Consensus geometry
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Consensus Sequence: | RpGpXhpXPXGXXh |
(φψ)-conformation: | aalapppbaaepbb |
Pattern: | [R] | [D] | [KV] | [V] | [AS] | [QR] | [ARS] | [FIM] | [IMW] | x | [EH] | [IW] | [R] | [EK] | [G] | [KNR] | [GT] | [CIV] | [DQS] | [GST] | [P] | [RWY] | [G] | [DPQ] | [HV] | [ALV] | [KWY] | [L] | [DK] |
Conservation: | 1.210 | 1.785 | -0.919 | 0.634 | -0.177 | 0.116 | -0.964 | -0.581 | -0.772 | -1.348 | 0.105 | -0.672 | 1.210 | 0.128 | 1.785 | -0.389 | -0.489 | -0.453 | -0.708 | -0.836 | 2.360 | -0.581 | 1.785 | -0.772 | -0.419 | -0.900 | -0.581 | 0.634 | -0.191 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kf6_A_287 | 1kf6 | A | 287 | 315 | RDKVSQAFWHEWRKGNTISTPRGDVVYLD | HHHHHHHHHHHHHHT-SB--TT--BEEEE | aaaaaaaaaaaaaavaxxxbaaexbbbxx |
1nek_A_286 | 1nek | A | 286 | 314 | RDVVARSIMIEIREGRGCDGPWGPHAKLK | HHHHHHHHHHHHHTT-SB-SSS-SBEEEE | aaaaaaaaaaaaaavabpbeaaepbbxbx |
1qla_A_301 | 1qla | A | 301 | 329 | RDVVSRRMIEHIRKGKGVQSPYGQHLWLD | HHHHHHHHHHHHHTTTSB--TT--BEEEE | aaaaaaaaaaaaaavaxxxbaaexbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kf6_A_287 | 1kf6 | A | OAAOXALOACETATE ION | R - 287 |
1kf6_A_287 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | R - 287 |
1kf6_A_287 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | D - 288 |
1kf6_A_287 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | K - 289 |
1kf6_A_287 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | Q - 292 |
1kf6_A_287 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | H - 296 |
1nek_A_286 | 1nek | A | OAAOXALOACETATE ION | R - 286 |
Clusters included in this Subclass |
CLUSTER: HE.11.16 |