Information on SUBCLASS 2.2.18 |
Subclass Accession number: 8934
Subclass: 2.2.18 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.8 +/- 10.5 Average RMSD (Å) : 0.667 +/- 0.115 Consensus geometry
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Consensus Sequence: | XXXchX |
(φψ)-conformation: | aalpaa |
Pattern: | [HKT] | [HRS] | x | [QRT] | [EHY] | x | [ANV] | x | [EFL] | x | [ANS] | x | [GLT] | [EKN] | [AIT] | [AQ] | [KQR] | [KQ] | [A] | [AFK] | x | x | [GT] | [DN] | [ILV] | [KPT] | [KL] | [AFL] | x | x | [CLV] | x | [NQT] | [AI] | x | x | x | [ENS] | [GKL] | [GKR] | x |
Conservation: | -0.254 | 0.084 | -1.043 | 0.084 | 0.873 | -0.818 | -0.931 | -0.931 | -1.043 | 0.336 | 0.197 | -0.142 | -1.269 | 0.648 | -0.367 | 0.527 | 1.211 | 1.856 | 2.677 | -1.043 | 0.407 | 0.408 | 0.969 | 2.442 | 1.324 | -0.142 | 0.359 | -0.480 | -1.269 | -1.043 | 0.309 | -1.494 | 0.197 | 0.383 | -0.480 | -0.367 | -1.156 | 0.535 | -1.494 | -0.029 | -0.029 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1afr_A_185 | 1afr | A | 192 | 232 | TSFQERATFISHGNTARQAKEHGDIKLAQICGTIAADEKRH | HHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaavbaaaaaaaaaaaaaaaaa |
1kkc_A_44 | 1kkc | A | 44 | 84 | HHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQAIKFNGGG | HHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaalxaaaaaaaaaaaaaaaaa |
1pie_A_274 | 1pie | A | 278 | 318 | KRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKD | HHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaavxaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1afr_A_185 | 1afr | A | FE2FE (II) ION | E - 196 |
1afr_A_185 | 1afr | A | FE2FE (II) ION | T - 199 |
1afr_A_185 | 1afr | A | FE2FE (II) ION | H - 203 |
1afr_A_185 | 1afr | A | FE2FE (II) ION | I - 225 |
1afr_A_185 | 1afr | A | FE2FE (II) ION | D - 228 |
1afr_A_185 | 1afr | A | FE2FE (II) ION | E - 229 |
1afr_A_185 | 1afr | A | FE2FE (II) ION | H - 232 |
1kkc_A_44 | 1kkc | A | MNMANGANESE (II) ION | H - 44 |
1kkc_A_44 | 1kkc | A | MNMANGANESE (II) ION | Y - 48 |
1kkc_A_44 | 1kkc | A | MNMANGANESE (II) ION | H - 88 |
1kkc_A_44 | 1kkc | A | MNMANGANESE (II) ION | W - 92 |
Clusters included in this Subclass |
CLUSTER: HH.2.106 |