Information on SUBCLASS 2.3.7 |
Subclass Accession number: 8941
Subclass: 2.3.7 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 18.7 +/- 22.5 Average RMSD (Å) : 0.760 +/- 0.251 Consensus geometry
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Consensus Sequence: | pXpppX |
(φψ)-conformation: | aabpaa |
Pattern: | x | [AENT] | [EK] | [FLY] | [ADS] | [ADGKT] | [KMY] | [DEPS] | [HKNT] | x | [EQ] | [LVY] | x | x | x |
Conservation: | -0.869 | -0.275 | 1.434 | 1.318 | 0.412 | -0.869 | -0.057 | 0.219 | 0.008 | -1.095 | 2.131 | 0.361 | -0.699 | -0.998 | -1.023 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b4u_B_221 | 1b4u | B | 221 | 235 | PEELSKMPHIQYLRE | HHHHTT--HHHHHHH | aaaaaaxxaaaaaaa |
1bbu_A_45 | 1bbu | A | 49 | 63 | HAEFDGKENEELEAL | HHHHTT--HHHHHHH | aaaaaabxaaaaaaa |
1e1o_A_45 | 1e1o | A | 49 | 63 | HEEFDAKDNQELESL | HHHHTT--HHHHHHH | aaaaaaxxaaaaaaa |
1f8r_A_173 | 1f8r | A | 177 | 191 | LNKYDTYSTKEYLIK | HHHTTSSBHHHHHHH | aaaaaabxaaaaaaa |
1p5h_A_317 | 1p5h | A | 325 | 339 | ETKFADKDKFEVTEW | HHTTTTS-HHHHHHH | aaaaaabxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f8r_A_173 | 1f8r | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 174 |
1f8r_A_173 | 1f8r | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 175 |
1f8r_A_173 | 1f8r | A | FUCFUCOSE | Y - 175 |
Clusters included in this Subclass |
CLUSTER: HH.4.74 |
CLUSTER: HH.5.59 |