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Information on SUBCLASS 2.11.1
Subclass Accession number: 8972
Subclass: 2.11.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 85.2 +/- 0.0
Average RMSD (Å) : 0.100 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: RTXDGA
(φψ)-conformation: aaFbaa
Pattern: [T][I][V][S][R][T][CT][D][G][A][QT][T][S][R][W][AS][A][M][Q][I][G][M][S][FM][I][S][A]
Conservation:0.267-0.346-0.346-0.3460.2670.267-0.9590.8800.880-0.346-1.5720.267-0.3460.2673.945-1.266-0.3460.2670.267-0.3460.8800.267-0.346-1.112-0.346-0.346-0.346
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e6y_A_12261e6y   A12261252TIVSRTTDGAQTSRWAAMQIGMSFISAHHHHHHS-TTHHHHHHHHHHHHHHHHHaaaaaaFbaaaaaaaaaaaaaaaaaaa
1hbn_A_2121hbn   A212238TIVSRTCDGATTSRWSAMQIGMSMISAHHHHHHS-TTHHHHHHHHHHHHHHHHHaaaaaaFbaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e6y_A_12261e6y   A     AGM4-METHYL-ARGININE R - 1239
1e6y_A_12261e6y   A     TP7PHOSPHORIC ACID N-(1-HYDROXY-7-MERCAPTO-HEPTYL) THREONINE ESTER R - 1239
1e6y_A_12261e6y   A     F43FACTOR 430 M - 1243
1e6y_A_12261e6y   A     TP7PHOSPHORIC ACID N-(1-HYDROXY-7-MERCAPTO-HEPTYL) THREONINE ESTER M - 1243
1e6y_A_12261e6y   A     F43FACTOR 430 Q - 1244
1e6y_A_12261e6y   A     F43FACTOR 430 M - 1247
1e6y_A_12261e6y   A     F43FACTOR 430 I - 1250
1hbn_A_2121hbn   A     ZNZINC ION V - 214
1hbn_A_2121hbn   A     ZNZINC ION S - 215
1hbn_A_2121hbn   A     ZNZINC ION R - 216
1hbn_A_2121hbn   A     ZNZINC ION T - 217
1hbn_A_2121hbn   A     ZNZINC ION C - 218
1hbn_A_2121hbn   A     ZNZINC ION D - 219
1hbn_A_2121hbn   A     GOLGLYCEROL A - 221
1hbn_A_2121hbn   A     GOLGLYCEROL S - 224
1hbn_A_2121hbn   A     AGM4-METHYL-ARGININE R - 225
1hbn_A_2121hbn   A     TP7PHOSPHORIC ACID N-(1-HYDROXY-7-MERCAPTO-HEPTYL) THREONINE ESTER R - 225
1hbn_A_2121hbn   A     GOLGLYCEROL R - 225
1hbn_A_2121hbn   A     GOLGLYCEROL A - 228
1hbn_A_2121hbn   A     F43FACTOR 430 M - 229
1hbn_A_2121hbn   A     TP7PHOSPHORIC ACID N-(1-HYDROXY-7-MERCAPTO-HEPTYL) THREONINE ESTER M - 229
1hbn_A_2121hbn   A     F43FACTOR 430 Q - 230
1hbn_A_2121hbn   A     F43FACTOR 430 M - 233
1hbn_A_2121hbn   A     F43FACTOR 430 I - 236
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e6y_A_12261e6y   A AC2F43 BINDING SITE FOR CHAIN AQ - 1244
1hbn_A_2121hbn   A AC4TP7 BINDING SITE FOR CHAIN DR - 225
1hbn_A_2121hbn   A AC1F43 BINDING SITE FOR CHAIN DQ - 230
1hbn_A_2121hbn   A AC1F43 BINDING SITE FOR CHAIN DM - 233

Clusters included in this Subclass
CLUSTER: HH.5.170