Information on SUBCLASS 3.2.3 |
Subclass Accession number: 8979
Subclass: 3.2.3 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 10.0 +/- 11.3 Average RMSD (Å) : 0.700 +/- 0.158 Consensus geometry
|
Consensus Sequence: | XpGXphX |
(φψ)-conformation: | aagppaa |
Pattern: | [AILV] | [klv] | [eprs] | [AGIT] | [akl] | x | [AENR] | [GN] | x | [DNPS] | [AGILY] | [adv] | x | x | x | x |
Conservation: | 0.838 | -0.238 | -0.874 | -0.234 | -0.384 | -0.529 | 0.231 | 3.132 | -0.644 | 0.486 | -0.874 | -0.454 | -1.142 | 0.393 | 0.082 | 0.211 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b0z_A_211 | 1b0z | A | 211 | 226 | LLPIAVAGLNIDRMME | HHHHHHHT--HHHHHH | aaaaaaagxxaaaaaa |
1e39_A_447 | 1e39 | A | 448 | 463 | VKLGKMEGIDGKALTE | HHHHHHHTS-HHHHHH | aaaaaaavbpaaaaaa |
1ezm_*_265 | 1ezm | - | 273 | 288 | IRSAQNRNYSAADVTR | HHHHHHTT--HHHHHH | aaaaaaavbxaaaaaa |
1o04_A_99 | 1o04 | A | 104 | 119 | ALETLDNGKPYVISYL | HHHHHHH---HHHHHH | aaaaaaagxpaaaaaa |
1ujp_A_230 | 1ujp | A | 232 | 247 | LVRALEEGRSLAPLLQ | HHHHHHTT--HHHHHH | aaaaaaavxxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e39_A_447 | 1e39 | A | GOLGLYCEROL | M - 453 |
1e39_A_447 | 1e39 | A | GOLGLYCEROL | E - 454 |
1o04_A_99 | 1o04 | A | EDO1,2-ETHANEDIOL | Y - 101 |
1o04_A_99 | 1o04 | A | EDO1,2-ETHANEDIOL | L - 108 |
1ujp_A_230 | 1ujp | A | CITCITRIC ACID | S - 230 |
1ujp_A_230 | 1ujp | A | CITCITRIC ACID | A - 231 |
Clusters included in this Subclass |
CLUSTER: HH.3.88 |