Information on SUBCLASS 3.8.2 |
Subclass Accession number: 9010
Subclass: 3.8.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 65.9 +/- -15.5 Average RMSD (Å) : 0.267 +/- 0.058 Consensus geometry
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Consensus Sequence: | ThGhphp |
(φψ)-conformation: | aagbpaa |
Pattern: | [Y] | [LM] | [GP] | [M] | [V] | [LWY] | [A] | [M] | [AMV] | [AS] | [I] | [G] | [FIV] | [L] | [G] | [F] | [IV] | [V] | [W] | [A] | [H] | [H] | [M] | [FY] | [T] | [AV] | [G] | [LM] | [DS] | [LV] | [DT] | [QT] | [QR] | [AS] | [Y] | [F] | [MT] | x | [A] | [T] | [M] | [ITV] |
Conservation: | 1.342 | -0.469 | -0.901 | 0.384 | -0.094 | -0.946 | -0.094 | 0.384 | -1.318 | -0.808 | -0.094 | 0.863 | -1.052 | -0.094 | 0.863 | 0.863 | -0.332 | -0.094 | 3.257 | -0.094 | 1.821 | 1.821 | 0.384 | 0.289 | 0.384 | -1.046 | 0.863 | -0.394 | -0.843 | -0.808 | -0.941 | -1.043 | -0.567 | -0.791 | 1.342 | 0.863 | -1.043 | -1.424 | -0.094 | 0.384 | 0.384 | -1.105 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ar1_A_305 | 1ar1 | A | 305 | 346 | YLPMVLAMAAIGILGFVVWAHHMYTAGMSLTQQAYFMLATMT | HHHHHHHHHHHHHHTTS-GGGG-GGGT--HHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaagbxaaaaaaaaaaaaa |
1m56_A_313 | 1m56 | A | 313 | 354 | YLPMVYAMVAIGVLGFVVWAHHMYTAGLSLTQQSYFMMATMV | HHHHHHHHHHHHHHTTS-GGGGGTTSS--HHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaaSbxaaaaaaaaaaaaa |
2occ_A_270 | 2occ | A | 270 | 311 | YMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMI | HHHHHHHHHHHHHHTTS-GGGG-TTS---HHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaaaaaavxpaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ar1_A_305 | 1ar1 | A | CUBCU B BINDING SITE. | H - 325 |
1ar1_A_305 | 1ar1 | A | CUBCU B BINDING SITE. | H - 326 |
Clusters included in this Subclass |
CLUSTER: HH.14.8 |