ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 0.1.48

Subclass Accession number: 906
Subclass: 0.1.48

Type: EH beta-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 4.1 (>75 %)  4.1.3 (>75 %)
GO : GO:0016829 (>75 %)  GO:0016830 (>75 %)  GO:0016833 (>75 %)
SCOP : 51621 (>75 %)  88704 (>75 %)

Number of loops: 3

Average sequence ID (%) : 7.4 +/- 9.9
Average RMSD (Å) : 0.567 +/- 0.058

Consensus geometry

d (Å): 9

delta (°): 0-45

theta (°): 90-135

rho (°): 90-135

Consensus Sequence:	XpXp
(φψ)-conformation:	bbaa

Pattern:	x	[FLV]	[HS]	x	[NST]	[ENP]	[DKT]	[EQT]	[IL]
Conservation:	-1.000	-0.128	0.650	-1.695	0.525	-0.389	-0.650	0.002	1.685

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1beb_A_147	1beb	A	148	156	RLSFNPTQL	EEE--HHHH	bbbbxaaaa
1gmx_A_41	1gmx	A	41	48	.FHLTNDTL	.EE--HHHH	.xxbbaaaa
1the_A_147	1the	A	152	160	SVSDSEKEI	EE-S-HHHH	xbxxbaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1gmx_A_41	1gmx	A	ACTACETATE ION	M - 52
1gmx_A_41	1gmx	A	ACTACETATE ION	R - 53
1gmx_A_41	1gmx	A	ACTACETATE ION	D - 54

Clusters included in this Subclass

CLUSTER: EH.3.262