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Information on SUBCLASS 4.31.1
Subclass Accession number: 9080
Subclass: 4.31.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 67.9 +/- -20.1
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 0-45 rho (°): 180-225
Consensus Sequence: AhYXDcIL
(φψ)-conformation: aaNbllaa
Pattern: [T][Q][Y][A][T][A][AV][Y][PT][D][DN][I][L][D][DN]x[TV][Y][FY][DG][KLV][DE][Y][IV][EN][D][K]
Conservation:0.4070.4071.548-0.1630.407-0.163-1.2791.548-1.0600.978-0.433-0.163-0.1630.978-0.433-1.494-1.0921.5480.345-0.998-2.001-0.3241.548-0.445-0.8890.9780.407
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e6v_A_3341e6v   A334360TQYATAVYPDNILDDYVYYGLEYVEDKHHHHHTTSBTTHHHHHHHHHHHHHHHHaaaaaaaNxvlaaaaaaaaaaaaaaaa
1e6y_A_13441e6y   A13441370TQYATAAYTDDILDNNTYYDVDYINDKHHHHHTTTBTTHHHHHHHHHHHHHHHHaaaaaaaNbvlaaaaaaaaaaaaaaaa
1hbn_A_3311hbn   A331357TQYATAAYTDNILDDFTYFGKEYVEDKHHHHHTTTBTTHHHHHHHHHHHHHHHHaaaaaaaNbvvaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e6v_A_3341e6v   A     F43FACTOR 430 T - 334
1e6v_A_3341e6v   A     F43FACTOR 430 Q - 335
1e6v_A_3341e6v   A     F43FACTOR 430 Y - 336
1e6v_A_3341e6v   A     COM1-THIOETHANESULFONIC ACID Y - 336
1e6v_A_3341e6v   A     F43FACTOR 430 A - 337
1e6v_A_3341e6v   A     F43FACTOR 430 T - 338
1e6y_A_13441e6y   A     F43FACTOR 430 T - 1344
1e6y_A_13441e6y   A     F43FACTOR 430 Q - 1345
1e6y_A_13441e6y   A     F43FACTOR 430 Y - 1346
1e6y_A_13441e6y   A     COM1-THIOETHANESULFONIC ACID Y - 1346
1e6y_A_13441e6y   A     F43FACTOR 430 A - 1347
1hbn_A_3311hbn   A     F43FACTOR 430 T - 331
1hbn_A_3311hbn   A     MGN2-METHYL-GLUTAMINE Q - 332
1hbn_A_3311hbn   A     F43FACTOR 430 Q - 332
1hbn_A_3311hbn   A     MGMAGNESIUM ION Q - 332
1hbn_A_3311hbn   A     MGN2-METHYL-GLUTAMINE Y - 333
1hbn_A_3311hbn   A     F43FACTOR 430 Y - 333
1hbn_A_3311hbn   A     COM1-THIOETHANESULFONIC ACID Y - 333
1hbn_A_3311hbn   A     MGMAGNESIUM ION Y - 333
1hbn_A_3311hbn   A     MGN2-METHYL-GLUTAMINE A - 334
1hbn_A_3311hbn   A     F43FACTOR 430 A - 334
1hbn_A_3311hbn   A     MGMAGNESIUM ION A - 334
1hbn_A_3311hbn   A     MGN2-METHYL-GLUTAMINE T - 335
1hbn_A_3311hbn   A     MGMAGNESIUM ION T - 335
1hbn_A_3311hbn   A     MGN2-METHYL-GLUTAMINE A - 336
1hbn_A_3311hbn   A     MGMAGNESIUM ION A - 336
1hbn_A_3311hbn   A     MGN2-METHYL-GLUTAMINE A - 337
1hbn_A_3311hbn   A     MGMAGNESIUM ION A - 337
1hbn_A_3311hbn   A     GOLGLYCEROL D - 344
1hbn_A_3311hbn   A     GOLGLYCEROL D - 345
1hbn_A_3311hbn   A     GOLGLYCEROL F - 346
1hbn_A_3311hbn   A     GOLGLYCEROL Y - 348
1hbn_A_3311hbn   A     GOLGLYCEROL F - 349
1hbn_A_3311hbn   A     GOLGLYCEROL E - 352
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e6v_A_3341e6v   A AC4F43 BINDING SITE FOR CHAIN D THE SUBUNITS A, B, C CONTRIBUTE TO THE BINDING SITE THE ENZYME COMPLEX BINDS TIGHTLY (BUT NOT COVALENTLY) TO COENZYME F430T - 334
1e6v_A_3341e6v   A AC4F43 BINDING SITE FOR CHAIN D THE SUBUNITS A, B, C CONTRIBUTE TO THE BINDING SITE THE ENZYME COMPLEX BINDS TIGHTLY (BUT NOT COVALENTLY) TO COENZYME F430Q - 335
1e6v_A_3341e6v   A AC6COM BINDING SITE FOR CHAIN D SYMMETRY RELATED SUBUNITS CONTRIBUTE TO THE BINDING SITEY - 336
1e6y_A_13441e6y   A AC1F43 BINDING SITE FOR CHAIN DT - 1344
1e6y_A_13441e6y   A AC1F43 BINDING SITE FOR CHAIN DQ - 1345
1e6y_A_13441e6y   A AC1F43 BINDING SITE FOR CHAIN DY - 1346
1hbn_A_3311hbn   A AC2F43 BINDING SITE FOR CHAIN AT - 331
1hbn_A_3311hbn   A AC2F43 BINDING SITE FOR CHAIN AQ - 332
1hbn_A_3311hbn   A AC2F43 BINDING SITE FOR CHAIN AY - 333

Clusters included in this Subclass
CLUSTER: HH.5.149