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Information on SUBCLASS 6.11.1
Subclass Accession number: 9140
Subclass: 6.11.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 6.5 +/- 7.9
Average RMSD (Å) : 1.050 +/- 0.173

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hXhXXXhXXX
(φψ)-conformation: aalabpbpaa
Pattern: [ALM][AEKS]xxxx[CGK]xx[DHPQ][FIV][DEPS]xx[ASV][FIV]xxxxxxx
Conservation:1.4400.573-0.635-0.132-0.028-0.635-0.063-0.635-0.8370.3722.1720.774-1.541-0.1321.1812.158-0.937-0.937-0.4580.0480.127-0.837-1.038
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1nn5_A_481nn5   A5375LSSYLQKKSDVEDHSVHLLFSANHHHHHTTSS---HHHHHHHHHHHaaaaaavabbbpaaaaaaaaaaa
1omw_A_1141omw   A114136MKELLACSHPFSKSAIEHVQGHLHHHHHTT---S-HHHHHHHHHHHaaaaaalabwbxaaaaaaaaaaa
1p49_A_1871p49   A201223AALNCLGLLHVPLGVFFSLLFLAHHHHHTTS----HHHHHHHHHHHaaaaaavabxbxaaaaaaaaaaa
1p7g_A_461p7g   A6183LEKFRKGEAQIDIRAVLRDLSFHHHHHHTTSS---HHHHHHHHHHHaaaaaavabxbxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE L - 57
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE H - 69
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE F - 72
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE S - 73
1nn5_A_481nn5   A     2DT3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE R - 76
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE P - 189
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE I - 192
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE V - 193
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE T - 196
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE L - 200
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE G - 214
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE V - 215
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE S - 218
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE L - 219
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE L - 222
1p49_A_1871p49   A     BOGB-OCTYLGLUCOSIDE I - 226
1p7g_A_461p7g   A     MSESELENOMETHIONINE R - 74
1p7g_A_461p7g   A     MSESELENOMETHIONINE L - 77
1p7g_A_461p7g   A     MSESELENOMETHIONINE R - 78
1p7g_A_461p7g   A     MSESELENOMETHIONINE S - 81
1p7g_A_461p7g   A     MSESELENOMETHIONINE N - 85
1p7g_A_461p7g   A     MSESELENOMETHIONINE I - 92
1p7g_A_461p7g   A     MSESELENOMETHIONINE F - 93

Clusters included in this Subclass
CLUSTER: HH.6.45