Information on SUBCLASS 8.7.1 |
Subclass Accession number: 9181
Subclass: 8.7.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 35.3 +/- 33.1 Average RMSD (Å) : 1.025 +/- 0.050 Consensus geometry
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Consensus Sequence: | XXhpXhXpXpXp |
(φψ)-conformation: | aagbppabapaa |
Pattern: | x | [l] | [dkr] | x | [eqy] | [kl] | [ek] | x | [aqr] | [fg] | [sty] | x | [fl] | x | [st] | x | [st] | x | [et] | [es] | [v] | [ail] | [aq] | [h] | [el] | [itv] |
Conservation: | -0.625 | 1.261 | -0.275 | -0.694 | -0.206 | -0.431 | 0.743 | -1.113 | -0.415 | -0.159 | -0.555 | -0.764 | 0.547 | -0.834 | 0.479 | -0.904 | 0.483 | -0.643 | 0.105 | 0.309 | 1.261 | -0.415 | -0.134 | 3.774 | -0.728 | -0.066 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ao0_A_108 | 1ao0 | A | 110 | 135 | QLKQQLENQGSIFQTSSDTEVLAHLI | HHHHHHHHTT----SS-HHHHHHHHH | aaaaaaaaagxxbabaxaaaaaaaaa |
1gdo_A_104 | 1gdo | A | 106 | 131 | PLREELKARGYTFVSETDTEVIAHLV | HHHHHHHHTT----S--SHHHHHHHH | aaaaaaaaagxbxabaxaaaaaaaaa |
1noy_A_270 | 1noy | A | 270 | 295 | YLDLYKKFAFTNLPSFSLESVAQHET | HHHHHHHHT----S--SHHHHHHHHH | aaaaaaaaavbxbabaxaaaaaaaaa |
1noy_B_270 | 1noy | B | 270 | 295 | YLDLYKKFAFTNLPSFSLESVAQHET | HHHHHHHH-----S--SHHHHHHHHH | aaaaaaaaalbbxabaxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1noy_B_270 | 1noy | B | ZNZINC ION | E - 288 |
Clusters included in this Subclass |
CLUSTER: HH.9.16 |